Ictalurus punctatus (channel catfish): 108275418
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Entry
108275418 CDS
T04658
Name
(RefSeq) trace amine-associated receptor 13c-like
KO
K05051
trace amine associated receptor
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108275418
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108275418
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Biogenic amine
Trace amine
108275418
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
108275418
NCBI-ProteinID:
XP_017341711
UniProt:
A0A2D0SGW4
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Position
2:complement(645859..646908)
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AA seq
349 aa
AA seq
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MPEALNSSLLEEVDLKTYCFPDSNVSCVKASYNVASKTVLYFILVFAMTITILGNSVVII
SIAHFKQLHTPTNILVMSLALVDLLLGLTVMPFSMIRSVDGCWYYGEEFCFLHSSFDMCL
TGASIFHLISIAIDRYQAVSYPLQYPSRVTIPVAWFMAVTSWTASVVYSYTLLCSKANVE
KLDEYIASISCLGYCGLLFNALWAALDACICFFLPCSVMFCLYAQIFFISKKHARKIEGV
KPGRNDMNLTKFSQRVKHENKAAKTLGIVVGAFICCWMPFFVTSLLDPFINFATPLVLYD
VFIWLGYINSTLNPIIYGLFYPWFRKTLHLIVTLKIFCSHSSDMKLYAS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagctctaaattcatctttactggaagaagtagatttgaaaacatactgtttt
cctgactcaaacgtctcttgtgtgaaagcttcttacaacgtagcgtctaaaacggtgtta
tattttatactggtgtttgcgatgactattacaattctagggaactctgttgtcattatt
tctatagctcattttaaacaactgcacacacctacaaacattttggtgatgtctttagca
ctggtggatctgcttctgggactcacagtcatgccattcagcatgattagatctgtggat
ggctgctggtactacggtgaagaattctgttttttacactctagttttgacatgtgtctc
actggagcgtctattttccatctaatttctatcgcaattgatcgatatcaagctgtgagc
tatccacttcagtacccttcaagagtaactatacctgttgcatggtttatggcagttacg
agttggactgcatctgtagtgtactcctacacgctcctgtgttcaaaagcaaacgtggaa
aaattagatgaatacattgcatctataagttgcctgggatattgtggccttttgttcaat
gcactatgggcagcattggatgcatgtatatgtttctttttaccatgttctgttatgttt
tgtctgtatgcacaaatatttttcatttccaagaaacacgcaagaaaaattgaaggtgtg
aagccaggcagaaatgatatgaacttaaccaagttttcacaaagagtgaaacatgagaac
aaagcagcaaaaactcttggtattgttgtaggagccttcatttgttgctggatgccattt
tttgtcacctcgctacttgatccttttattaacttcgccacccctttagttctttatgat
gtcttcatctggttgggttatattaactcaactttaaaccccatcatatatggccttttc
tatccatggttcaggaaaacactgcatctcattgttacactaaaaatattttgttctcat
tcatctgatatgaaactgtatgcatcatga
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