Ictalurus punctatus (channel catfish): 108275425
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Entry
108275425 CDS
T04658
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275425
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108275425
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GFIT
Motif
Pfam:
PRDM2_PR
SET
DUF4954
Motif
Other DBs
NCBI-GeneID:
108275425
NCBI-ProteinID:
XP_017341725
Ensembl:
ENSIPUG00000009718
UniProt:
A0A2D0SHH5
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Position
14:22019185..22032879
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AA seq
1140 aa
AA seq
DB search
MADSVAFYTEPCMETEPECSTGAISDGASEEPNEKKANHERCVNVGRRHVDCWFCEECKE
YFLEECLVHGPPVFVPDTPTALGVPDRAALTVPSGIQIVREGLDVDVCCMDENIPKGALF
GPYQGQLVGAKDKPSGTYSWMIVDEDNTYKTVDGCDVTKANWMRYIRKSSEDGERNLSAF
QHGEHIYFRVCRRMAVRERLRVWYSDEYAKRLQDMCEGSPNRKADTGINSEDVTQHQEEA
KGPVLRSTIHGRRTLIKHGSDEADSQPQVKKKKIDLIFKDVVEASLEASQCQNNPLNSTL
SLPRPRAQASSVFSQSGTFSANVVETMLGQAERKVPHVACGLVPVKQLESSLERYVKVED
AQEEPKMISEGPSTSFCPNCVRLKRRIRELEAELLHFKQQEQTETLCLPPSESLPSDDLR
VVEAMTPTPAGMEEDDQDVDSADESITADMIVAADDSSKLSVSPGRRIRRFKQEWLKKFW
FLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKKCLQLYKLR
MHPEKTEEMCRNMITLFNAAYHLAVEGRPYSDIRPLAELLKKCELKVVDQYMNESDCQIL
IHHISRAFKEDLVEKIRLSPFLGVIMDGQNDDLLADTVAVYVQFITTEGPPATEFVSLQR
LSGSCVDGYLQAVDRAFGDLGLRLQDMLVVGLGIDGSNISSSLRANLYIAIRKTFPFVLC
LPVMIHRPHLEILDSICGKELSCLDDLENNLKHLLSFYRYSPRMMTELRSTAPTLSEETE
FLGDIRAVRWIIGEPNVLNALIKDYLEVVSHLKGISGQTQRADAAAIALSLLQFLMDYQS
VKLIYFLLDIIAILSRLAFNFQGDYLLVSQVDAKIVEAIHEIGQLVDSPGEYLQEFEDNF
RESFNGVDLKNLRVAESKFQSIREKICLKTQGILAQRIDKHSHSVVQACKVLDLSSWPRN
RDDLQSYGEEEILVIFDHVETIPSSGRELSHDRVDLRGSLIREWRDLKADYFSMNCFKEV
MSHVCKYKQRFPLLNQILQLLRVLPTSTLCCDKGREALHKVRRNNHSRLTLEQMNDLLTL
AVNGPPIANFDGKRPLDSWFEEKSGNSYTLSAEVLSRLSHTEQKPVLHSMDVNSEFYPGI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcggactccgtcgccttttacactgagccatgtatggaaactgagccagaatgcagc
acaggtgccatcagtgatggtgcttctgaggagcccaacgagaaaaaagccaaccatgag
cgctgtgtgaacgtgggacgacgacatgttgactgctggttctgtgaagaatgtaaggag
tatttcctagaggaatgtctagtccatggcccgcctgtgtttgtgcctgatacgcccacc
gcgcttggagtgcctgatcgtgcagctctcactgtgccttcggggattcagatcgttagg
gaaggcctggacgtggacgtgtgctgcatggatgagaatatcccgaaaggagctctgttt
ggcccctaccaaggccagctcgtaggagccaaggacaaaccgtcaggaacgtactcttgg
atgattgtcgatgaggacaacacttacaaaactgtcgatggctgtgacgtaactaaagca
aactggatgagatacatccggaagtcttcagaggacggtgagagaaacttgagtgcgttc
cagcacggtgaacatatttacttccgagtgtgtcgcagaatggcggtcagggagaggctt
cgcgtgtggtacagcgacgagtacgcaaaacgtctacaggatatgtgcgagggcagtccc
aaccgcaaggcggacacagggataaattcagaagacgtcacccaacaccaagaagaagct
aaaggcccagttctgcgctcgactatacatggaaggagaaccctcataaagcacgggagc
gacgaggcagatagccagcctcaagtgaagaagaaaaaaatcgatctcatattcaaagat
gtcgtagaagcatctctggaagcaagccagtgtcagaacaatccactaaacagcactcta
tcattaccaagaccaagagcacaggccagcagtgtcttcagccaatccggtacattttca
gcaaatgtagtggagacaatgctgggccaggccgagagaaaagtgcctcatgtggcctgt
ggacttgtgcctgtaaaacagctagagagcagtcttgaaagatatgtcaaagtagaagat
gcacaggaggagcccaagatgattagtgaaggcccatcgacatctttttgcccgaactgt
gttagactgaagagacgtatacgtgaactggaagcagagcttcttcattttaaacaacaa
gagcagaccgagacattgtgcttgcccccatccgaatccctgccgagcgatgacctgaga
gtggtggaggctatgacgcccactccagccgggatggaggaagatgaccaggatgtcgac
tctgcagatgaatccattaccgctgacatgatcgtagctgccgacgactcgtcgaagctg
tccgtcagcccgggtcggcgaatccgccgctttaaacaagagtggctcaagaagttttgg
ttcttgcgttattctccgacgttgaacgagatgtggtgccacgtgtgccgacagtacacc
gtacagtcgtcaaggacttccgctttcattatcgggtccaagcagttcaagatccacacc
atcaagcttcatagccagagcaatctccacaagaaatgtctgcagttgtacaagctacgc
atgcatcctgagaagacggaagagatgtgtcggaacatgatcacgctgttcaacgccgct
taccatctcgcggtcgaaggacggccgtattccgacatccggcccttagcagagctgtta
aaaaagtgtgaacttaaggtagtcgatcagtacatgaacgagagcgactgccagatcctc
atccaccacatttcccgagcgtttaaagaggacttggtggagaagatccgtctctcccct
ttccttggcgtaatcatggatggccaaaatgatgatttgctagccgacaccgttgcggtt
tatgtgcagttcatcaccacagagggtccgcctgctactgagtttgtctccttacagaga
ctgagtggtagctgtgtagatggataccttcaagctgttgaccgtgcctttggtgaccta
ggtctacggctacaggacatgctcgtggttggcttgggaatagatggttccaacatctct
tctagtcttcgggcaaacctctacatagccatacggaagacttttccgttcgtattgtgc
ctgccggtaatgattcatcgcccccatctagagatactggattccatctgtgggaaggag
ctttcatgtttagatgacttggagaacaacttgaagcatttgttgagcttctatcggtac
tcccctcgtatgatgaccgaactgaggtcaaccgcgcctactctgtctgaggagacggag
tttctcggggatatacgagcagtccggtggatcataggtgagcctaatgtcctaaacgct
ctcatcaaggactatctcgaagtggtgagccatcttaaaggcatcagcggtcagacccag
agggcagacgcagccgccattgctctttctcttctgcagttcctgatggattaccagtct
gtgaagcttatctatttccttttggatatcattgctattctgtcacgccttgccttcaac
tttcagggagattatctactggtttctcaagtagatgccaagattgtggaagccattcat
gagattggtcagctagtcgattctccaggagagtacctgcaagagtttgaggacaatttt
cgcgagagcttcaacggcgtggacctcaagaacctgcgggtggccgaatcgaagttccag
tccatccgggagaaaatctgcctgaagacccaagggattctggcccaacgtatcgataag
cacagccattctgttgtacaggcttgcaaggtgctcgacctgtcctcatggccacgcaat
agggatgacctccaaagctacggagaggaagagatcctcgtcatctttgaccacgtggag
acgattccctcgtcgggtcgtgagctgtcacacgaccgagtggatttgcgtggaagcctg
ataagagaatggagggatctcaaagctgactattttagcatgaattgttttaaggaagtg
atgagtcatgtctgcaaatataagcagcgctttcctttgctcaaccaaatcctgcagttg
ttgagggtcttgcccacgtcgactctctgctgcgacaaaggacgagaggctttgcacaaa
gtaagaaggaacaaccactcgagactgactctggaacagatgaacgacctgctcacgttg
gctgttaacgggccacctatcgccaacttcgatggcaagaggccgctagacagctggttt
gaggagaagtcggggaatagttacacactttctgcagaagtgttgagcagactatcccac
actgagcaaaaacctgtgctgcactccatggacgtgaattcagagttttatcctggtatt
tga
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