Ictalurus punctatus (channel catfish): 108275438
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Entry
108275438 CDS
T04658
Name
(RefSeq) AP-3 complex subunit beta-2 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
108275438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275438
Membrane trafficking [BR:
ipu04131
]
Endosome - Lysosome transport
Others
AP-3 complex
108275438
Endosome - Golgi transport
108275438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
Alpha_adaptinC2
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
108275438
NCBI-ProteinID:
XP_017341750
Ensembl:
ENSIPUG00000013722
UniProt:
A0A2D0SHJ9
LinkDB
All DBs
Position
14:4007785..4066443
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AA seq
1226 aa
AA seq
DB search
MKMTPMQKLLQLPANAVNMVKTVQGVAHGQEEARSPVLTPDGGLQNWYNAVQPEELRHLR
ISSTTGGGGGGGDAGEGGGTQDDGLPSAQTQPLRHDDLKEMLDSNKDSLKLEAMKRIVAM
IARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQ
LIRASALRVLSSIRVTIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDPEQKDQLI
EVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLT
RYARTQFLNPNVNESLLEESGEKAFYGSDDDEDDEDKKAEATALAKRKPYVMDPDHRLLL
RNTKPLLQSRNAAVVMAVAQLYFHLAPKAEVGVIAKALVRLMRSHSEVQYVVLQNVATMT
IKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNISTILREFQTYIKSMDKDFV
AATIQAIGRCATNIGEVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPEQHSDIIK
HMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQIINLAA
KLYLTNSKQTKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTDKSGALSKYAKKLFLAL
KPAPVLESPFKDRDHFQLGSLSHLLNTKAGGYQELPDWPESAPDPSVRNVEQEEAIDTSE
GRIGLLGDWREVPEWTKCTSRKERKEKKVEKPFYSDSEGESGPTESADSETNSSSGEDSG
SEESGSGSESEESDDESESDEEEKDREEEKTKKKKKKIDKSKSKKPESAESDQSSGEEQK
RSRKRGKEQKRLSESESEEEDSESESSESESESEDESDSDMDTRKKKPALTAPALHEGEL
IDSMEISLFRDFQETPATKPPPAKQTKKESKKESKEMSLLDLDDFEPTPSTQVTPVSNFL
SSSLVADLEGLSLTDTVLAPTTIASSCSMKMYELLHRITGEGLGVEYCFCRQPFSPDPNM
VAVQIQFTNNTSSETKNLHIEEPKLQSGMRIKEFTEIEVLPAGESVTVVMGIDFCDSTQA
ANFQLCTHTRKFFVSIQPPVGELMMPVFLTENEFKKEQGQLMGMNELSEKLSLGEKCQSD
HVIVERVTATANLSRVPCGSEKECSPPVPPSPSPVFRFAGKTVSGDSLVLVTVVKKEAGE
AQLTVNCEKMVIGTMLVKDILHALTQ
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgacaccgatgcagaagctgctccagctgccggctaacgccgtgaacatggtg
aagacggtgcagggggtggcacacggccaggaggaggcgcgcagccccgtgctcaccccg
gacggcgggctgcagaactggtacaacgccgtgcagccagaggagctccgccacctccgt
atctccagcacaaccggaggaggaggaggaggaggagacgcaggagaggggggaggcacg
caggacgatgggctccccagtgctcagacgcaacccctgcggcacgatgatttgaaggag
atgttggacagcaacaaggactctctaaagctggaggctatgaaaaggattgttgcaatg
atcgccagagggaaaaacgcatctgatctctttcctgctgtggtgaaaaatgtggcctgc
aagaacatcgaggtaaagaagctggtgtacgtgtacctagtgcgctatgctgaggaacag
caggatttggctctactctccatctctaccttccagcgagggctcaaggatcctaatcaa
cttattcgtgcgagcgccttgcgtgttctgtccagtatccgagtcaccatcatcgtgccc
attatgatgctggcgatcaaagaggctgcttcggatatgtctccatacgtccgcaagacg
gccgctcacgccatccccaaactctacagcctggaccctgagcagaaagaccagctaatt
gaagtcattgaaaagctgcttgctgataaaacaactctggtcgcaggcagtgtggtgatg
gcgttcgaggaggtttgtccagagcggatcgatctgatccataagaattatcgtaaactc
tgcaacctgctgattgacgtggaggaatggggtcaggtagttatcatcaacatgctcacc
cgctacgccaggactcagttcctcaaccccaacgttaacgagtccctgctggaggagagt
ggagagaaggcattttatggttcggacgatgatgaggatgatgaagataagaaggctgag
gcaaccgcacttgccaagaggaagccatatgttatggaccctgatcacaggctgttgctc
cgaaacaccaaacctctgctacagagccgcaacgcagctgtggtgatggcagtcgctcag
ctctatttccatctagctcctaaagcggaggtaggcgtaatcgctaaggcactggtgagg
ctgatgaggagccacagtgaagtccagtatgttgttcttcaaaatgttgcaaccatgacc
atcaaaaggagggggatgttcgagccatacctgaagagcttctatatccgctctactgac
cccacgcagatcaaaatactcaagcttgaagtgttaaccaatctggcaaatgaaaccaac
atatctaccattttgagagagttccagacctacatcaaaagtatggataaggattttgtg
gcagccactatccaggccattggccgctgtgccaccaacatcggggaggtgagagacacc
tgcctcaatggtctcgtccaactcctctcaaacagggatgagctggtagtagccgagtcg
gtggtggtgattaagaagctcctgcagatgcaacctgagcagcacagcgacatcatcaaa
catatggccaagctgacagacaacatacaggtcccgatggcgagagcgagcatcctgtgg
ctgattggtgagtactgtgagcacgtacctaaaatcgctcctgacgtcctgaggaagatg
gccaaaagcttcaccaacgaggaggacattgtcaagttgcaaatcatcaatctggctgcc
aagctctaccttaccaactccaaacagaccaagctccttacgcagtatgtactcaacctg
gcgaagtatgaccagaactatgacatcagagaccgcgcacggttcatccgccagctcatc
gtccccacggataaaagtggagccttgagtaaatacgccaagaagcttttcctggctctt
aaacctgcacctgtactggagtctccatttaaagacagagaccatttccaacttggctcg
ctgtctcacctgctgaataccaaagcgggcggctaccaggagctgcccgactggcccgaa
tcagcacccgacccctccgtgcgcaacgtggagcaagaggaagccatagacaccagtgag
gggcggatcggtctccttggagactggcgagaggttccagagtggactaaatgcaccagc
aggaaggagcggaaggagaagaaggtggaaaagcctttctactccgactcggagggagaa
tccggacccaccgagtctgctgacagtgagaccaactccagcagtggcgaggacagcggc
agcgaggagagcggctcgggttcggagagcgaagagagcgacgacgagtcggagtctgat
gaggaggagaaggatagagaggaagagaagaccaagaagaagaagaagaaaatagacaag
agcaaatctaagaaacccgagagcgcagagagtgatcagagcagtggagaggaacagaag
agaagcaggaaaagagggaaggagcagaagagactgtctgagtcagagagtgaggaagaa
gacagcgagtctgaaagcagcgagtccgagtccgagtcagaggacgagtcagactcggat
atggacaccagaaagaagaagcccgcactcacagctcctgccctgcatgaaggagaactt
attgacagtatggagatcagtctcttcagagactttcaagagacacctgcaacaaaacca
ccacctgcgaagcagaccaaaaaagagagcaagaaagagtccaaggaaatgtctctgcta
gatctggacgactttgagcccactccctcaactcaggtgaccccggtcagcaacttcctg
tcaagcagcctggtggcagatctagaggggctgtcactgactgacactgtactcgccccc
actaccatcgcctcgtcatgctcgatgaaaatgtatgagttattgcaccgcatcacagga
gagggtctgggggttgagtactgcttctgcaggcagcccttcagccctgatcctaacatg
gtggctgtgcagatccagttcaccaacaacaccagttcagagaccaagaacctacacatc
gaagagcccaaactgcagtctggtatgaggatcaaggagttcaccgaaatcgaggtttta
cccgcaggcgaatccgttactgttgtaatgggcattgacttctgcgactccacgcaagca
gccaacttccagctttgtactcacactcggaagttctttgtgtccatccagccaccagtc
ggagaactgatgatgcctgtttttctgacagagaatgagtttaagaaagagcaaggtcag
ctgatgggaatgaatgaactctcagagaagctaagcctgggggagaagtgtcagagtgat
cacgttattgtagagagagtcactgctacagctaatctcagcagagtaccctgtggctct
gagaaagagtgcagccctcctgttcctccttctccgtcgcccgtattcaggtttgctggg
aagacggtgagcggcgacagccttgtgctcgtcactgtggtgaagaaggaggccggagaa
gcccagctcactgtgaactgtgagaagatggtgattggtacgatgctcgtgaaggacatc
cttcatgccctgacccagtga
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