Ictalurus punctatus (channel catfish): 108275484
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Entry
108275484 CDS
T04658
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03460
Fanconi anemia pathway
ipu04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108275484 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
108275484 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275484 (her9)
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108275484 (her9)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
108275484 (her9)
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
108275484 (her9)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
108275484
NCBI-ProteinID:
XP_017341825
Ensembl:
ENSIPUG00000021012
UniProt:
W5UG01
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All DBs
Position
15:complement(17632297..17634137)
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AA seq
285 aa
AA seq
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MPADTMEKQTASPIAGAPASGTHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAAMSTDTAVLSKYRAGFSECMNE
VTRFLSTCEGVNTEVRSRLLNHLSVCLGQMMALNYPPTAPAQHPHLAQPLNVQVPSSAVS
SKLSPSEVVPSKVFGGFQLVPATDGQFAFLIPNPAFASATTPVIPLYANAGVPVAVSASP
VHASSAPPAVSPVQGMTSFAGVSQAASPVGVSAGPESSEPVWRPW
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgatactatggagaaacagacagcgtctccgattgctggtgctcctgcaagc
ggaacacacaccccggacaaaccaaagaatgctagtgagcatagaaagtcttcaaagcca
atcatggagaaacgccgcagagcaagaatcaacgaaagcctaggccaactcaagactctc
attcttgatgctcttaaaaaagatagttcgagacactctaaattggagaaagctgatatt
ctcgagatgacagtgaaacacttgaggaacttgcagcgagttcagatgactgcagccatg
tcaactgacaccgccgtcctgagcaaataccgcgccggattcagcgagtgcatgaacgag
gtgacgcgctttctgtccacgtgtgaaggcgtaaacacggaggtgcgctcgcgactcctc
aaccacctatccgtctgtctgggacagatgatggcgttgaattacccgccgactgcacca
gcccagcatcctcaccttgcgcagcctctgaacgtgcaggttccctcctctgcagtgagc
tccaaactgagcccgtcagaagtggtgccgtccaaagtgttcgggggattccagctggtg
cccgccactgacggacagttcgcctttctcatccctaacccagcgtttgcgtccgctacg
accccggtgatccctctctacgctaatgccggagttccagtggctgtcagcgcgagccct
gtgcacgcgagctcggccccgccagcggtctccccggtgcagggcatgacctcgttcgcg
ggcgtgtcgcaagccgcgagtcctgttggtgtgagcgcgggcccggagagcagcgagcca
gtgtggcggccctggtag
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