Ictalurus punctatus (channel catfish): 108275499
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Entry
108275499 CDS
T04658
Name
(RefSeq) leiomodin-3
KO
K22030
leiomodin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108275499
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108275499
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
108275499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomodulin
LRR_6
Motif
Other DBs
NCBI-GeneID:
108275499
NCBI-ProteinID:
XP_047016394
Ensembl:
ENSIPUG00000005162
UniProt:
A0A979F863
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All DBs
Position
15:10115606..10130702
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AA seq
676 aa
AA seq
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MSKYCDQEPYMEEIDEDKILEGLSAEELQQLQNEMDDIAPYKTIPVGMRQNNASVEATTE
GDKEWESEDQENIDEDVILAGLTAEELKQLQNEMEVIVPDERVPVGMRQKDQTDKPPTGS
FDHRSLVDYLYWERQSKRLLEEERIPTTLLPSQKKRAEELKNIVKEDNKNIVYEEIGKDA
EIGDCKEVIEEVIEEVKDKVVDVEVGENDQKKQPIKTETQESSIIMFANSQPAPNFSDSQ
KERETQRAELNEDESKVAKMKQTDQIQCKPVPSAYENWVPKKEERVISKLKIPKLAHGDG
LIKKTARPSGNDTNLESTLDKIRNHNSYITEINLNNIENIPKEMLLDYIEALKKNKHVKI
FSIANTGADENVAFSLANMLRENRSITTLNIESNFITGKGIIAIMRCLQFNETLTELRFH
NQRHMLGHHAEMEVARLLKANNTLLKVGYHFELPGPRMVVTNLLTRNLDRQRQQRKEEQR
LQQIKEQRQIMEVYESHLNFPPGLLEMLGEYIPGMELICAAHGPQLLSQSPPEPSIESTP
CHKLQKTHHPTGQHPRSSDSDSRNMLKDVKLKKTPKRRDPLLDLTKKEEKRDGRANIQLR
STFKHTNTASEGSLDDRANLKDVIKALKPVPRRRQPPKEELTPRDLLLNEIRQSNVAYLK
AVPLPKVLESRETSLL
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtactgtgaccaggaaccctacatggaggaaattgatgaagacaaaattctt
gaaggtctttcagctgaagagctccagcagctccagaacgagatggatgatattgcccca
tataaaacaataccagtgggaatgagacagaataacgcatctgttgaagcaacgactgaa
ggggacaaagaatgggagtctgaggatcaggaaaacattgatgaagatgtgattttggca
ggtctcactgctgaagagctcaaacagctccagaatgaaatggaggtaattgttcctgat
gagagagtgccagtagggatgcgacagaaggaccaaactgataaacccccaacaggttca
tttgaccatagatcactagtggactacctgtactgggagagacaatctaaacgtttactg
gaagaagaaagaatacctaccaccctgctccccagtcagaaaaaaagggcagaagagctg
aagaatatagtgaaagaagataataaaaatattgtgtatgaggaaattggaaaagatgct
gagataggggattgtaaagaggtgattgaggaagtgatcgaagaagtaaaagacaaagtt
gtcgatgtagaagttggtgagaatgatcaaaagaaacaaccaattaaaacagaaactcaa
gagagtagcattattatgtttgccaactctcagccagctccaaatttctctgactcacaa
aaagagagagaaactcaaagagctgaattgaatgaggacgaatcaaaagtggctaaaatg
aagcaaacagatcagattcaatgtaaacctgttccctcagcctatgagaactgggttcct
aagaaagaagagagagtcatatccaaattgaagatcccaaagcttgcacatggtgatggt
ttgattaaaaaaactgcaaggccatctgggaatgataccaatctggaaagcactctggac
aaaatccgcaatcataactcctatatcactgagatcaacctaaacaatattgagaacatt
cctaaagaaatgctcttagactacattgaggcactgaagaagaacaagcatgtgaagatc
ttcagcattgcaaacacaggtgcagatgaaaatgtggctttttcattggccaacatgctg
cgagagaacaggagcatcactacactgaacattgaatccaacttcattactggaaaaggt
atcattgcgatcatgcgctgtctacagttcaatgagactttgacagaactccggttccac
aatcagaggcacatgctgggccatcatgcagagatggaagtggcacgtctcctgaaagcc
aacaacaccctgcttaaggttggctaccattttgagcttcctgggcccaggatggtggtg
actaacttgctcactaggaaccttgaccggcagcgacaacaaaggaaggaagagcagagg
cttcagcagataaaagagcaacgtcagatcatggaggtgtatgagagccacctgaacttc
ccacctggtctgctggagatgttaggagaatatattcctggaatggaacttatctgtgct
gcccatggtcctcagcttctttcacaaagccctccagaaccttctattgaatcaacacca
tgtcacaagctacaaaagacacaccaccctactggacaacatccacgcagttcagactca
gactcccgcaatatgttaaaagatgtgaagcttaagaagactccaaaacgtcgtgaccca
ctcctggatttaactaaaaaagaagagaaaagagatgggagggctaatattcagttacgg
agcactttcaagcacacaaacacagcaagtgaaggctctctggatgatagggccaacctg
aaagatgtgataaaggcactgaaaccagttcctcgaagaaggcagccaccaaaagaggaa
ctaacaccacgtgacttactcctcaatgaaattagacagagcaatgtggcttatctaaaa
gcggtgcctcttcccaaagttctggaatccagggaaaccagtctcttatga
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