Ictalurus punctatus (channel catfish): 108275568
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Entry
108275568 CDS
T04658
Name
(RefSeq) voltage-dependent calcium channel gamma-5 subunit
KO
K04870
voltage-dependent calcium channel gamma-5
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04260
Cardiac muscle contraction
ipu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108275568
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108275568
04261 Adrenergic signaling in cardiomyocytes
108275568
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108275568
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108275568
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Gene cluster
GFIT
Motif
Pfam:
Claudin_2
PMP22_Claudin
SUR7
DUF716
DUF202
Motif
Other DBs
NCBI-GeneID:
108275568
NCBI-ProteinID:
XP_017341958
Ensembl:
ENSIPUG00000010655
UniProt:
A0A2D0SGV9
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Position
2:23587814..23599894
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AA seq
270 aa
AA seq
DB search
MSMCRRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGVILPFNQSTSIHTYLHSGLWK
LCFLSGEEMGRCFTIEYLMPISVQLTSESTVSVLKMIRTATPFPLVSLFFMFIGFVLSNI
GHIRPHHTVLAFASGIFFILSGLSLVVGLVLYISSVNDEMLNRSKSNEAYFSYRYGWSFA
FAAISFLLTKSAGVMSVYLFTKRYTAEELYRPHTSFYRQRFSNCSEHSTQFLQRHHSPSD
ISSEASLQMYSSYPALLKSPEYGQVSSSLC
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgtgtcgcagaaaagcgctgaccctgctgagcagtgtgttcgcagtgtgtggc
ctgggcctgctgggtatagctgttagcactgattactggctctacctggaggagggggtc
atcttgcctttcaaccagagcaccagcatccacacgtatctacattctggcctgtggaaa
ctctgctttctgtcaggagaggagatgggccgctgcttcaccatagagtatcttatgcct
ataagcgtgcaactcaccagtgaatctacagtcagtgtcctgaagatgattcgcacagcc
acccccttccccctggtcagcctcttcttcatgttcattggctttgtgctcagtaacatc
ggacacattcgccctcaccacacagtactggccttcgcttctggaatcttcttcatcctc
tcaggcctttctctggtggtgggtcttgttctttacatctccagcgtcaatgatgagatg
ttgaacagaagtaaaagtaatgaggcctatttcagctatagatacggctggtcctttgcc
tttgccgctatctccttcctactgacaaagagtgccggcgtcatgtcggtctacctgttc
actaagcgctacacggctgaggagttgtacaggcctcatacaagcttctatcggcagcgt
ttcagcaactgctccgagcactcgactcagtttctgcagcgccaccacagtccctcagac
atctccagtgaggcctcactccaaatgtacagcagctacccagccctgctcaagagccct
gagtatggacaagtctcctcttcactctgctaa
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