Ictalurus punctatus (channel catfish): 108275653
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Entry
108275653 CDS
T04658
Symbol
hoxc1a
Name
(RefSeq) homeobox protein Hox-C1a
KO
K09301
homeobox protein HoxA/B/D1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275653 (hoxc1a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108275653 (hoxc1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
108275653
NCBI-ProteinID:
XP_017342045
Ensembl:
ENSIPUG00000022416
UniProt:
A0A2D0SIC9
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All DBs
Position
15:4723290..4731265
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AA seq
286 aa
AA seq
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MCRGDAVMTSYQVFTCDRDTEFTKVNCANKAARQDLDPGKLQIRLEGHFLSAFRSETFAG
VCAKRSRNSDLRRPDQDHFCLNPPRWSEQAGSGAHVSPSLHTFTRKCCCALDPINARVHN
INSCDDPRYHLAFVKPGNTKDAGSTRLHEATQMEKPFEWMKLKRNQASTGKARVTGAQNF
LQSVKVDGGHNEIEDSPHTLSRSSFSTKQLTELEKEFHYSRYLTRARRVEIASALQLRED
QVKVWFQNRRMKLKKTQRLIHTHPEPGSCLELHSNTTDTCALPEES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggggggatgctgtcatgacttcttaccaggtgtttacatgtgatagagacaca
gagttcaccaaagtcaactgtgcaaacaaggcagcgcgtcaggatttagacccaggcaaa
ctccaaatccgacttgaaggacatttcctgtcggcgttccggtcagaaacgttcgcaggc
gtgtgcgcgaaacggtctaggaattcggacttgagacgtccagatcaagaccacttctgc
ttgaatccaccccgatggagtgaacaggccggttccggagcccacgtctctccttcctta
cacactttcacaaggaagtgttgttgcgcgctcgacccaatcaacgcgcgcgtgcataac
atcaactcatgtgatgacccaagatatcatctcgcttttgtgaaacccggtaacaccaag
gatgccggttctacccgtttacacgaggccacacagatggaaaagcccttcgaatggatg
aagctgaagcgcaaccaagcgagcactgggaaagcccgtgtaaccggcgcacagaatttc
ctccagtctgtgaaagtggacggtggacacaatgaaatcgaggacagtccacacacactg
tcccggagcagctttagcaccaaacagctcacggagctggagaaggagttccactacagc
aggtacctgacgcgcgcgcgtcgggtggagatcgcgagcgcgctgcagctccgtgaggat
caggtcaaagtgtggttccagaacagacgcatgaaactgaagaaaacgcagcgtctcata
cacacacatccagaaccgggaagctgtttggaattgcactcaaacacaacggacacgtgt
gcgcttccagaggagagttag
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