Ictalurus punctatus (channel catfish): 108275658 Help Entry 108275658         CDS       T04658                                  Name (RefSeq) integrin alpha-5   KO K06484   integrin alpha 5 Organism ipu  Ictalurus punctatus (channel catfish) Pathway ipu03266   Virion - Herpesvirus ipu04145   Phagosome ipu04510   Focal adhesion ipu04512   ECM-receptor interaction ipu04810   Regulation of actin cytoskeleton ipu04820   Cytoskeleton in muscle cells ipu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:ipu00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     108275658  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     108275658  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     108275658   09144 Cellular community - eukaryotes    04510 Focal adhesion     108275658   09142 Cell motility    04820 Cytoskeleton in muscle cells     108275658    04810 Regulation of actin cytoskeleton     108275658  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     108275658  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:ipu04147]     108275658    04515 Cell adhesion molecules [BR:ipu04515]     108275658    04090 CD molecules [BR:ipu04090]     108275658 Exosome [BR:ipu04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    108275658 Cell adhesion molecules [BR:ipu04515]  Integrins   Integrin alpha subunits    108275658 CD molecules [BR:ipu04090]  Proteins   108275658 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 Motif Other DBs NCBI-GeneID:  108275658 NCBI-ProteinID:  XP_017342049 Ensembl:  ENSIPUG00000018509 UniProt:  W5UJ57 LinkDB All DBs Position 15:563708..634123 Genome browser AA seq 1049 aa AA seqDB search MGSTEHRSTPEETLLRMCCSLFIAYLLPWTGAFNLDIENPSVYTGPAGSYFGYSVDFYMA QSTRDASIIVGAPKANTSQPDIKVGGSVFYCPWGRNLFECHSIEFDRQGDLNVSINNVET QAEFKSHQWFGATVRAHEDSVLACAPLYSWRTQQDMPESDVTGSCYLSIKNFTKFVEYAP CRTEFHGMKGQGYCQGGFSADFTKDGKVVLGGPGSYFWQGQLISAVKEEIIKAYYPGYFL TSVAGQIQTKQKKEINFDDSYMGYSVAVGEFNGDDDEDFVTGVPRGVLLHGQVSILNGSL ETMKTFIGEQMGSYFGYAVAATDINNDGLTDLLVGAPMFMVRDSDGRLEELGRVYVYLQT GPLELAPCLPHLTGTQIFSRFGSSITPLGDLNQDGFNDIAISSPFGGKDEQGLVFIYNGY AKGLREKPSQVIAGQWSSAAPPAPPVSFGYTMKGGKDLDHNGYPDLIVGAFGADKAVLYR SRPIVNTSATLIVYPTLINPEEKTCTISSGNQTTHVSCVNLSFCLSANGKHLPENLVFNV EVQLDQLKQKGAVHRALFLDTQQASLQRKLKVPNEAKVCHETKIYLRDEKEFRDKLSSIF IALNFSLDAQAPADRHGLWPILNYQTTELIEQKAQILLDCGEDNVCVPDLKLSVNGDRKE VYMGDDNALTLTFNARNDGGGAYEAELYVVLPSEADYSGIARNNESLTQLTCSYETENKT RYLICDLGNPMKSGTNLWAGLRFTVPRLRDSQKVVQFDLQIRSKNENNSQSEVVPYRLEV VVKADVILQGVSRPDKVFFPPPNWKVTKNIAVEQEIGPPVEHIYELVNNGPSHISHTVLQ LKCPMKLQAQRFMYPLEIITEGPVNCTTYNVVNPMNIKLQQSAKQPPLLNHHVEKRETHR GELAELTNLSCSSVECWTLQCNVGVLEKGTSAILQVRSRIWGETFNMKKYKNFILECVAS YSVEKMPYAILPKEIPRGSKIMTTPVVWNKPDSPYDVPLWIIILAVLAGLLLLALLIYVL YKLGFFKRTPYYGTAMEKAQLKPQVASEA NT seq 3150 nt NT seq  +upstreamnt  +downstreamnt atgggttccacagagcaccgctcaaccccggaggaaactttactccgtatgtgctgctca ctcttcatcgcttaccttctcccctggaccggcgcgttcaacttagacatagagaacccg tcggtatacaccggacccgcgggcagctattttggttattctgtggacttttatatggca cagtcgacccgagatgcaagtatcatagttggagcaccaaaagccaacaccagccagccg gacatcaaagttggaggctctgtgttctactgcccatggggccgtaacctgtttgagtgc cacagcatagagtttgaccggcagggtgatcttaatgtgagcatcaataatgttgaaact caggctgagttcaagtcccaccagtggtttggagcaactgtacgtgcacatgaagactct gtcttggcttgtgcccctctctactcttggagaacccaacaagacatgcctgagtcagat gtcaccggctcctgctacctgtccattaaaaacttcaccaaatttgtggagtatgctccc tgccgcacagaattccatggaatgaagggccagggttactgtcaaggtggattcagtgct gatttcaccaaggatgggaaggtagtacttggaggaccaggcagctatttttggcaagga caacttatctctgctgtaaaggaggaaatcatcaaggcctactacccaggctatttcctc acatcagtggcaggccagattcagaccaagcagaaaaaagagatcaactttgatgacagc tacatgggttactctgttgcagtaggagaatttaatggagatgatgatgaagactttgtg acaggggttcccagaggtgtacttctgcatggccaggtgtctatccttaatggctctttg gagaccatgaaaacctttattggtgaacagatgggctcctactttggctatgctgtggct gctacagacatcaacaatgatggacttacagacttgttggttggtgctcccatgttcatg gtgcgtgactcagatgggaggttggaggaattagggcgagtatacgtgtatttacagacg ggtccactggagcttgcaccatgtctacctcacctcaccggaacgcaaatttttagtcgg ttcggcagctcgatcacaccgctgggagatctcaaccaggatggctttaatgacattgct atcagtagtccatttggtgggaaagatgaacaaggattggtcttcatctataatggttat gctaagggactcagggaaaagccctctcaagtgattgctggtcagtggtcatcagctgcc ccccctgctcctcctgtcagttttggctataccatgaaaggaggaaaagacttggatcac aatggctacccagatctcattgtgggagcttttggagctgacaaggccgttctttacaga tctcgcccaatcgttaacacgagtgccaccttaatcgtgtacccaacactgattaatcct gaggagaagacctgcaccatcagcagtggaaaccaaaccacacatgtttcttgtgtcaac ttgagcttctgcctttcagccaatgggaagcaccttccagaaaatctagtgtttaatgta gaagtgcagctggaccagctgaagcagaagggagctgttcatagggctttgtttttggac acccagcaggccagcctgcagaggaaactaaaggtgccaaatgaagccaaggtctgccac gagacgaaaatctacctgagggatgaaaaggaatttcgggataagctctcctccatcttt atcgctctcaacttcagtctggatgcacaggctcctgcagacagacacggcctctggccg atcctgaattaccagacgactgagctaattgagcagaaggcccaaattttactggactgc ggagaagacaacgtctgtgtcccagacctgaaactttctgtaaatggtgacaggaaagaa gtgtacatgggggatgataatgcactaaccctgactttcaatgcacggaatgatggaggt ggcgcctatgaagccgagctctacgtcgtgcttccttcggaggcggactacagtggaatt gcccgcaataatgagagtctaactcagctgacgtgcagctacgagacagagaacaagaca cggtacctcatctgtgaccttggaaatcccatgaagtctggcaccaatctgtgggcaggt ctgcgtttcacagttcctcggctgcgggattcacagaaggtggtacaatttgacctgcag attcgcagtaaaaatgagaataactctcagagtgaggttgtcccctacaggctggaggta gtggtcaaggctgatgttattttacagggtgtgtcccgaccagataaggtcttcttccca cctccaaactggaaagtgaccaagaacattgcagtggagcaagaaattgggcctcctgtg gagcacatctatgagttagtaaataatggtccaagccatattagccacacagtgcttcaa ctgaaatgtcccatgaagctgcaggcccagaggtttatgtaccctttggagatcatcact gaggggcctgtaaactgcacaacatacaatgttgtgaaccccatgaacataaagcttcag cagtccgcaaagcagcctccattattgaaccaccacgttgagaagcgtgaaacgcacagg ggagagctggctgagttgacaaacctgtcctgttccagcgttgagtgctggaccctgcag tgtaacgtgggtgtattggagaaaggtaccagtgccatactccaggtgcgttcacgcatc tggggcgagacgttcaacatgaaaaagtataagaattttattctggagtgtgtagcaagt tacagcgtggaaaagatgccctatgccattttgcccaaggagattccacgtggctctaaa attatgaccacacctgtggtgtggaataaaccagacagtccttatgatgtgcctttgtgg atcatcattctggcagtactggctggtcttttgttgctggctctccttatctatgttctg tataaacttggtttctttaagagaactccctactacggcactgccatggaaaaagcacag ctgaaacctcaggttgcatctgaagcttaa

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