Ictalurus punctatus (channel catfish): 108275735
Help
Entry
108275735 CDS
T04658
Name
(RefSeq) F-box/LRR-repeat protein 5
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108275735
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108275735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
Hemerythrin
F-box
LRR_4
DUF7885
LRR_6
LRR_At5g56370
F-box_4
Motif
Other DBs
NCBI-GeneID:
108275735
NCBI-ProteinID:
XP_017342156
Ensembl:
ENSIPUG00000000914
UniProt:
W5UCE0
LinkDB
All DBs
Position
15:6027136..6044246
Genome browser
AA seq
689 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYCDKLSKTNFSNNNDFRAFLQTLCATFNEFKIHEQI
ENEYIIELLQQRSRTTYNVHSDNKLSEMLSLFEKGLRNVKSECEQLNYARQLKERLEAFT
QDFLPHMKEEEEVFQPMLMEYFTYEELKAIKRQVIAQHCSQQQWDTAAEVLKGLNLWSQA
EVLHKAFKYSDHEKTEDECDSRASTHISALPQEVMVRLFRYLGPEDLCRCSQVCHTWAEL
VKTGSLWRHLYPVRWARGDYYRGPPGDPDQDPDAEDWVQNLQEEGRAYQEWDEDADIDES
EEACEDSLAISAVRKEKKLLNGMIQNLLPAVGSSVRTLSLAYSAAVSSKMVRQILSLCPN
LIHLDLTQTDVTDSAFESWAELGVCRTLEHLDLSGCEKLTDYTLQSLSLGLGDLTTPRFS
KNSPECKNKLLKTPPSAIKLLDKHSSYSLGRARTALVFKWRPGGRSMSCSPVWVLDPVEL
ADIEDAANWTRREGVAGHSEGRGGILGMQAGGKSCCCRRSTRRSFRTDISSTYLQQLYGT
LGEMQCGHSACCASDTALRTLKGAQCEPQATGCSSEFWTKCPSEGESRTDQTGACRALRF
LSLSGCYQITDMGLRCLSKGGGLPLLEHLNLSGCLFITEVGLHELVSVCPSLNDEHFYYC
DNINGPHADRASGCQNLQCGFRVCCRSGE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggctccttttcccgacgaggtggacgtgttcaccgggccgcactggagaatgaagcag
ttagtcggtctttactgcgataagctgtcgaagacgaacttctccaacaacaatgatttc
cgcgcattcctccagacgctctgcgccaccttcaatgagttcaagatccacgagcagatc
gagaacgagtacatcatcgagctgctgcagcagcgcagccgcaccacctacaatgtgcac
tccgacaacaagctctccgagatgctgtcgctgtttgaaaaaggcctcaggaacgtcaag
agcgagtgcgagcagctgaactatgcacggcagctgaaagagcgtctcgaggctttcacc
caggacttccttcctcacatgaaggaggaagaggaggtgttccagcccatgctgatggag
tactttacctatgaggagctgaaggccataaagagacaggtgatagcgcagcactgcagc
cagcagcagtgggacacggccgccgaggtgctgaagggcttaaacctgtggagccaggcc
gaggtgctgcataaggccttcaaatactccgaccatgagaagaccgaggacgaatgtgac
agtcgggcgagcacgcacatctcggcactgccacaggaggtaatggttcgactgtttcgt
tacctgggcccggaggacctgtgtcgctgcagccaggtgtgccatacctgggcagagctg
gttaaaacgggttctctgtggagacacctgtacccagtccgctgggccagaggcgattat
tatcgtggtcccccaggggacccagaccaggatcctgatgcagaagactgggtgcagaat
ctgcaggaggaaggacgagcctatcaggagtgggatgaggacgcagacatagatgaatcc
gaggaagcatgtgaggactcgctggccatcagtgccgtgcgcaaagaaaagaagttgctg
aatggaatgatccagaaccttctccctgctgtggggtcatcggttcgcaccctcagcttg
gcttacagtgcagccgtttccagcaaaatggtgcgtcagatccttagtctttgcccaaat
ctcatacacttggacctcacccagactgacgttaccgattccgctttcgaaagttgggcg
gagctgggggtgtgtcgcacgctcgagcatttggacctgtcgggctgcgagaagctcacc
gactacacgctgcagagtttgtctctgggtttaggcgatctgaccacgcccaggttctcc
aagaacagccccgaatgcaaaaacaagcttctgaagacaccgccgtctgccatcaaactt
ctggacaagcactccagctattctctaggacgtgcacgcacggctctcgtctttaagtgg
aggcctggtgggcggagcatgagctgcagccccgtctgggttctggatccagtcgagctt
gccgacatcgaggacgcagccaactggactagaagagaaggcgtggccggacacagcgaa
gggcgtggtggtattttagggatgcaggcgggaggcaagtcgtgctgctgtaggaggagc
acgaggcggagctttaggactgacattagctccacctacttgcaacagctgtatggcact
ctgggagaaatgcagtgtggccactctgcatgttgcgcctcagacaccgctttaaggaca
ttgaaaggagcgcagtgtgagcctcaagccacagggtgcagctctgagttttggactaaa
tgcccttccgagggcgagtcaaggactgatcagacaggagcctgcagagctctaaggttc
ctcagcctatcaggatgctatcagatcacagacatgggcctgaggtgtctctcaaaggga
ggagggcttcctctgctggagcatctgaacctctcaggctgtctgttcatcactgaagta
ggactgcatgagctggtgtccgtgtgtccctcgctcaacgacgaacacttctactactgc
gataacatcaacggtcctcatgctgaccgagcgagcggatgtcaaaatctgcagtgcggc
ttcagggtttgctgtcgctccggagagtga
DBGET
integrated database retrieval system