Ictalurus punctatus (channel catfish): 108275767
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Entry
108275767 CDS
T04658
Name
(RefSeq) transcription initiation factor TFIID subunit 11 isoform X1
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108275767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108275767
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108275767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
108275767
NCBI-ProteinID:
XP_017342216
Ensembl:
ENSIPUG00000013720
UniProt:
A0A2D0SIA6
LinkDB
All DBs
Position
15:22955177..22960061
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AA seq
226 aa
AA seq
DB search
MPAVLSRNNAHGHISPACVMADPARVKNEPGIDVATAEHVRQDKNAGEGSSGGTAASETT
TDQTNVKQEDKVGVAKEVSGGDEDDEGHSSAHPPAAKKPKVEPEKKKEKRHKVDEDEIQK
MQVLVSSFSEEQLNRYEMYRRSAFPKAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEI
VEEALDVCEKWGDTPPLQPKHMREAVRRLKTRDQIPNTKHKRILFN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgtattgagtcgaaacaacgcccacggccatataagcccggcgtgtgtcatg
gccgacccggcgcgcgtgaaaaacgaaccaggaattgacgtcgcgaccgcagagcatgtt
cggcaggataaaaacgcaggtgagggttcaagcggaggaaccgcggcttcggagacgaca
acggatcagaccaatgtgaaacaggaggacaaagtgggcgtggccaaggaagtgtcggga
ggagacgaggacgacgaaggacactcgagcgctcatcctccggctgcgaaaaaaccgaaa
gtggagccggagaagaagaaggagaagagacacaaagtggacgaagacgagatccagaag
atgcaagtgttggtgtcttcgttctcagaggagcagctgaaccggtacgagatgtacaga
cgctcggctttccctaaagcagccattaaaaggcttattcagtccatcacgggatcttct
gtgtctcagaacgtcgtcatcgccatgtccggcatctcgaaagtgttcgccggggagatt
gttgaagaagctctggatgtgtgtgagaagtggggagacactcctcctctgcagcccaaa
cacatgagggaggcggtgaggaggctgaagacccgggaccagatccccaacaccaaacac
aaacgcatcctcttcaactaa
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