Ictalurus punctatus (channel catfish): 108275783
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Entry
108275783 CDS
T04658
Symbol
irf10
Name
(RefSeq) interferon regulatory factor 10 isoform X1
KO
K09445
interferon regulatory factor 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275783 (irf10)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
108275783 (irf10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
108275783
NCBI-ProteinID:
XP_017342247
Ensembl:
ENSIPUG00000014604
UniProt:
A0A2D0SHQ8
LinkDB
All DBs
Position
15:23582360..23597667
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AA seq
384 aa
AA seq
DB search
MEQKESPMRLREWLIAQINSGKYAGLSWENEEKTLFKIPWKHAAKQDYRQNEDAALFKAW
AVYKGKYREGRDRADPSAWKTRLRCALNKSSEFQEVSERSQLDISEPYKVYRIVEDTQTE
ITVNTVKGKAYNEVHVQDVIHGKSNSSTVSDADGRLDLYSNNNVDGYDRHANVSVTLLTT
WSPITDFRLLVCLFYHGQLVQELITSSPEGCFILQGSAPVGNERIYGPCAAHTLCFPRLD
TLPIPTGIAEAMSRLLPHLEKGVLVWVAPDGVFIKRFCQGRVYWDGPLAQHTHQPNKLER
EKTCKLLDINVFLQELHQHLQAGGPRPRYAIDLCFGEEFPDKNQPKSKKLITAQVVPMFA
KEVLEGLQKHDAELKLSLKSDAQK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaaggagagcccgatgcgtctgagggaatggctgatcgcgcagatcaacagt
gggaagtacgccggactgagctgggagaacgaggagaaaactttatttaaaatcccgtgg
aaacacgcagctaagcaggactacaggcagaacgaagacgctgcgctcttcaaggcgtgg
gcagtgtataaggggaagtaccgtgagggtcgagacagagccgacccctcggcgtggaag
actcggctacgctgcgccctcaacaagagctctgagttccaggaagtttccgaacgcagc
caactggacatctctgaaccgtacaaggtgtataggatagtggaggatacacaaacagaa
atcactgtgaatacagtaaagggcaaagcatacaatgaagttcatgttcaggacgtaata
cacggcaaatcaaatagcagcacagtatcagatgcagatggcaggttggatctctacagt
aataacaatgttgacggttatgacagacatgcgaatgtttctgtcactctgctaacaaca
tggtcccccattacagacttccgactcctcgtgtgcctgttctatcacggccagctggtt
caggaattgatcacctcgtctccagagggatgttttatcctgcagggttcggcgccggtg
gggaacgagcgtatttacgggccgtgtgcagctcacactctgtgcttccctcgcctggac
actctgcccatcccaacgggcatcgccgaggccatgagccgccttttgcctcacctggag
aaaggcgtgttagtgtgggttgcccctgatggagtcttcatcaaacgcttctgtcaggga
cgagtgtactgggacgggccactcgcccaacacacacaccaacccaacaaactggagaga
gagaagacgtgcaaactgctcgacatcaacgttttcctgcaggagttacaccagcacctg
caggcaggagggccgaggccacgctatgcgattgacctgtgctttggagaggagtttcct
gataaaaatcaacccaagagcaaaaaactcattacagcacaggtggtgcccatgtttgct
aaggaggtgctagagggtctgcagaagcatgatgctgaactgaaactaagtcttaaatca
gacgcacagaaatga
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