Ictalurus punctatus (channel catfish): 108275804
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Entry
108275804 CDS
T04658
Symbol
abce1
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108275804 (abce1)
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
108275804 (abce1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
Fer4_6
AAA_22
AAA
AAA_15
AAA_16
RsgA_GTPase
AAA_29
Fer4_2
Fer4_10
AAA_23
NACHT
Fer4_4
Fer4_9
AAA_30
Fer4_16
SRP54
TsaE
Fer4_3
Fer4_21
Fer4_7
Motif
Other DBs
NCBI-GeneID:
108275804
NCBI-ProteinID:
XP_017342293
Ensembl:
ENSIPUG00000002215
UniProt:
A0A2D0SHV6
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All DBs
Position
15:complement(7729678..7737596)
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AA seq
599 aa
AA seq
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MADKNTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQCKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDAPPDWQEILAYFRGSELQNYFTKILEDDLKAIVKPQYVDQIPKTV
KGSVGSILSRKDDTKSEELVCEQLDLLHLRDRNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLRAAITIRSLISPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETAAEEEVKKMCRYQYPNMCKSMGDF
SLTITEGEFTDSEIMVMLGENGTGKTTFIRLLAGSLKPDGGGDVPILNVSYKPQKISPKF
KGSVRALLHDKIRDAYTHPQFVTDVMKPMQIESIIDQDVQNLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
RNTCANTPQNLLAGMNKFLAQLEITFRRDPNNFRPRINKLNSIKDVEQKKTGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaacacgcgaattgctattgtgaatcacgacaagtgcaagccgaagaaa
tgcaggcaggagtgcaagaagagctgtcctgtggtgcggatgggtaagctgtgtatcgaa
gtgacacctcagtgtaagatcgtgtggatctccgaatcactgtgtataggctgtggcatc
tgcatcaagaaatgtccgtttggtgctctgtctatcgtaaacctgccgagtaacctagag
aaggagaccacgcacagatactgcgccaactccttcaaactgcacaggttgcccattcca
cgacctggagaagtgttggggttggtgggcactaacggtatcgggaagtccactgctctc
aaaatcctggcaggaaaacagaaacccaatctgggaaaatatgatgctcccccggactgg
caggagatcctggcttatttccgaggctccgagctgcagaactatttcaccaagatcctg
gaggacgacctcaaggccatcgtaaagccacaatacgtcgaccagatccccaaaactgtc
aaggggtcagtaggctccattttgagcaggaaagatgacaccaagtcagaggagctcgtt
tgtgagcagctagatctgctgcacctgcgggatcgcaacgttgaggacctgtcaggagga
gagctgcagagattcgcttgcgctgtcgtctgcatccagagagcagacattttcatgttt
gatgagccgtccagttatctcgacgtgaagcagaggctgagagctgccatcaccatccga
tctctcatctcacccgacaggtacatcattgtagtggagcacgatctgagcgtgttggat
tacttgtctgattttatctgttgtctgtacggtgtgccgagcgcttacggagtcgtcacc
atgcccttcagcgtccgagaaggtattaatatcttcctggacggctatgtgccgacggag
aacctgcgtttccgcgagacttcgctggtgttcaaagtggccgagacggcagccgaagag
gaggtgaagaagatgtgccgctaccagtatcccaacatgtgcaagagcatgggagacttc
agcctcaccatcaccgagggagagttcaccgactccgagatcatggtcatgctcggggag
aatggtactgggaaaaccacattcatcagactgctggctggcagcctgaaacctgacgga
ggaggtgacgtgccaatcctgaacgtgagctacaagcctcagaaaatcagccccaagttt
aaaggcagtgttcgtgctttgctccacgacaagatcagagatgcgtacacacatccccag
tttgtcactgacgtcatgaagcccatgcagatcgagagcatcatcgaccaggacgtccaa
aatctgtccggtggtgagttgcagcgtgtggcgctggctctgtgtttgggtaaaccggct
gatgtttatctaattgacgaaccgtcagcgtacctggactcagagcagcgtctcatggct
gcccgcgtcatcaaacggttcattctgcatgcaaagaaaactgctttcgttgtggagcac
gacttcatcatggccacgtatctggcggaccgagtcattgtgttcgacggcattccttcc
agaaacacctgcgctaacacgccacagaacctgctggctggcatgaataaattcctggcg
cagctggagatcacattcagaagagacccaaacaacttcagaccaagaatcaacaaactc
aactcaatcaaggacgtggaacaaaagaaaaccggcaattattttttcctggatgactga
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