Ictalurus punctatus (channel catfish): 108275881
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Entry
108275881 CDS
T04658
Symbol
arhgef10lb
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108275881 (arhgef10lb)
03036 Chromosome and associated proteins [BR:
ipu03036
]
108275881 (arhgef10lb)
Membrane trafficking [BR:
ipu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108275881 (arhgef10lb)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108275881 (arhgef10lb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
CFAP43_N
DUF7675
IQ_SEC7_PH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
108275881
NCBI-ProteinID:
XP_017342434
Ensembl:
ENSIPUG00000020174
UniProt:
A0A2D0SIA4
LinkDB
All DBs
Position
15:16488408..16526123
Genome browser
AA seq
1310 aa
AA seq
DB search
MASPESLTPHPTESMPTGVAQTPQHEEEEDDEDEEQGEQFQFDDSEDENNAGPNPGEIKD
FVVSSAATGLQEVASGDNTNSNALYSQAVKCVPVTLHEELNGVTSAGQEGQAVPQQSHIT
SPDMVVRQPPDGRSVSIEPRVTEESEGTWKNNTHTYEGKPASESERGLPSSSSEVYPGPP
PDSEVIYDDVPCENIPSPDAGDDMIYEDVQRPGELAEGMDNGWSSSEFESYDEHSDTETK
PRTRSKISPDVRRIKEHCARTKRELAMRLGARDVSQIKQAYDIKVQQLMKAARNGTKDGL
EKTKIAMMRKVSFLNKKENTDDTEDDSGYLDVSVSEVKHPPPQLSPMPEGLTSQQTVRRH
ILGSIIQSEISYLDSLRRILKDYQKPLMEAEPRVLSTRKIQPIFYRVKEILQCHAMFQIA
LASRVAEWDQIETIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLK
KRQAVSTDRITLYGLMVKPIQRFPQFILLLQDMLKNTPSGHQDRLPLQLALTELETLAEK
LNEQKRLAEQLSEIQQLTRSNSDRALSKQLNSDQKQLILCETLIETVYGDKGQVLKSKER
KVFLLNDILICANINLKGLPDISSLVPAGPKYMVKWTAPLQQVQVVEVGLESSQNNDSVY
QPSGIKRLSSTNAQGKLILGPPKLYQELQELQHDLSVVEEVTLLVGTLQGSYQNLNTTVG
QDWCLALQRLIRIKEGEIQCANKCRLRLMVPGKPDKSGRPVSFTVVFNTPSPISKISWVN
RLHLAKVAQREENLPGWVCAEEDEKTKPPFWCPLLSCRVPVFSPKAQDLKLQTALHNPVQ
CALLGFSAASTSLPQGYLWVASGGDESYGQVEIFSLNRPSPRSVKSFLLASPALSIEYVM
EASADENEGQASEGAARIGNTICVGLQDGNILVYGSVDTAAQCLLTFQNPEGCPVLCLTH
TDNFLFAGLTNGKVAVYSRKFAEALWDPDSSRLLVIGYAPVLKLLNIDECVWASCANQVA
VIDSCNLTTQSFDAHPDPMVCVTHMVRAGGGVWMAFSEGSSLRLFHTETLEHLQEINILT
RSEYLSPGQTVCVTSLLICQGLLWVGTAQGIIITLPVPKLEGIPKITGKAMTSLNAHSGP
VDILVATSSTLSPELLKRDSLADGTDSGSGGEDLSHSSQESLQQQQVEGLSQKEAKPKGV
LLQYHLRSTSQLPGKLLTAQPEQVSNSSQESLEHTMEDGSIYELSDDPDVWVRGPGPSTK
DGTRKERVMSFTVISGGRGFRRLNAAGSSSSTSSGANETTLMVWQLPLTV
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcatccccggagtcccttaccccacatcctacagagtctatgcccactggtgtggca
cagaccccccagcacgaggaagaagaggatgatgaggacgaggagcagggagagcagttt
cagtttgatgatagtgaagatgagaacaatgctggtccaaaccctggggaaattaaagac
tttgtagtgtcctccgctgcgactggacttcaggaagttgcttccggtgacaacacaaac
tctaatgcactttacagtcaagcggtgaaatgtgtcccagtcactcttcatgaggaatta
aatggagtgacctctgctggtcaggagggtcaagctgttcctcagcaatcacacataaca
agcccagatatggtagtcaggcagcctcctgatggacgttctgtatctattgagccaaga
gtcacagaggagtccgaaggcacatggaagaacaacacacatacatatgaaggaaagcct
gcttctgaatcagagcgaggcttgccctcttcgtcctcagaggtgtacccaggtcctccc
cctgactcagaagtgatttatgatgatgtcccttgtgagaacattccctctcctgatgca
ggtgacgatatgatctatgaggatgtgcagaggcctggtgaattggcagaggggatggat
aatggctggagctccagtgagtttgagagttatgatgagcactcggacactgagaccaag
ccacggacacgtagcaagatttctcccgatgtacggcgcataaaggagcattgtgcccgg
accaaacgtgaactggccatgcggttaggggctcgagacgtcagccagatcaaacaggcc
tatgatatcaaggttcaacagctcatgaaagccgcccggaatggcactaaagatggtctg
gaaaagactaaaatagccatgatgcgcaaagtgtccttcctgaataaaaaagaaaacaca
gatgacacagaagacgattctggttacctagatgtatctgtttctgaagtaaaacaccca
ccacctcaactttctcccatgccagagggtctcactagccaacagactgtaagacgtcac
attcttggctctattatccagagtgagataagctacttggattccctcagaaggattctg
aaagattatcaaaagcctttaatggaggcagagccacgtgtcctgagtactagaaagatc
cagcccattttctaccgggtgaaagagatcctacagtgccatgccatgttccagatcgcc
ttggcttcccgcgtggctgaatgggaccaaatagagaccattggggatctgtttgtagcc
tctttttcaaaatcaatggttctggatgtatacagcgattacgtcaacaacttcacaaat
gcaatggctctcatcaagaaagcctgcatgtccaagcccgcatttctggaatttcttaaa
aaaaggcaggctgtcagcacagacagaatcaccctttacggcctgatggtgaagccaatc
caacgtttccctcagtttatactcctcttacaggacatgctgaagaacactccgtctggg
caccaggataggctgccgctgcagctggctctcactgagctggagaccttagcagagaag
ctgaatgaacagaagcgtctagcagagcagctctctgagatccagcaactaacacgcagc
aacagtgatcgcgccctcagcaagcagctgaactcagatcagaagcagctgattctgtgt
gaaaccctgatcgagacagtgtatggggacaaggggcaggttctcaagtccaaggagcgc
aaggtcttcctcctcaacgacatactcatctgtgcaaacatcaatctcaaggggcttccg
gatatcagcagcctggttcctgctggccctaagtacatggtgaagtggacagctcctttg
cagcaggttcaggtggtagaggtgggtctggagagctcacagaacaatgacagtgtttac
cagccaagtgggatcaaacgactcagctccaccaatgctcaaggcaagctgattctgggg
ccacccaaattgtaccaggaactacaggagctccagcatgacctctcagtggtggaggag
gtcacactcctagtgggtactctgcagggatcctatcagaatcttaacacaacagtgggg
caggactggtgcctggctctgcagaggctcatccgcatcaaagagggcgagatccagtgt
gccaacaagtgccgtttgcggctaatggtgcccggcaagcctgacaagtctgggcgtcca
gtcagtttcacggtggttttcaatactcccagcccaatcagtaaaatctcatgggtcaat
cgcttgcatcttgctaaagttgctcaaagggaagagaacttgcctggttgggtgtgtgca
gaggaggatgagaagactaagccaccattctggtgtccactcttgtcttgccgtgtgcct
gtgttctctccaaaagctcaagatctgaagctccagactgcccttcacaatccagtccag
tgtgctctgctgggtttctctgctgccagtacctctctgcctcagggctatctttgggtg
gccagtggtggcgatgaatcgtatggacaggtggagatcttctccctgaacagaccctct
ccacgctcggtgaagagtttccttctggcctcccctgcactaagcattgaatatgtaatg
gaggccagcgctgacgaaaatgaaggacaggcatccgaaggagctgccagaattgggaac
accatctgtgtggggttacaagatggcaatatcctagtttatggcagtgtggatactgct
gcccagtgcctcctgactttccaaaaccctgaaggttgtcctgttctgtgcctaacacac
acagacaacttcctcttcgctggattgactaatggcaaagttgcagtttatagcagaaag
tttgcggaagcgctgtgggatccagactccagcagactgcttgtgatcggatatgcgcct
gtgctcaaactcctcaatatagatgagtgtgtgtgggctagctgtgcaaaccaagtggct
gtgattgacagctgtaatctcaccacacagagctttgacgctcacccagaccccatggtg
tgcgtgacgcacatggtgcgagctggtggaggagtgtggatggcgttctcagagggctcg
tcacttcggctcttccacaccgaaactttggagcacctgcaggagatcaacatcttaaca
cgctctgaatatctgagtccaggtcagactgtgtgtgtcaccagcctgctcatatgccag
ggtctcctgtgggtgggcacggcccagggcatcatcatcaccttgccagtgcctaagctg
gagggcatcccgaaaataacaggcaaagcaatgacctccctcaacgctcacagcggccct
gtggacatcctggtggctacgtccagtactttatcccctgaactattgaagcgggactct
ctggctgatgggactgattcaggtagtggaggagaggacttgagccactcttctcaggag
tcactacaacagcagcaggtagaaggcttgtctcagaaagaagccaaacccaaaggggtg
ctgcttcaatatcacctccgctccacttcccagctccctggcaagcttctgaccgctcag
cctgaacaggtatccaattcctcccaggagtctctggagcacactatggaagatggttct
atctatgagctgagcgatgaccccgatgtttgggtcaggggaccaggaccatccacaaaa
gatggaacacggaaagaaagggtcatgtcattcaccgttatatcaggaggaagaggattc
cgcagactcaatgcggctggttcctcctcttctacttcctctggagccaatgagactaca
cttatggtctggcagctcccactgacggtctga
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