Ictalurus punctatus (channel catfish): 108275893
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Entry
108275893 CDS
T04658
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108275893 (calcoco1a)
04131 Membrane trafficking [BR:
ipu04131
]
108275893 (calcoco1a)
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
108275893 (calcoco1a)
Membrane trafficking [BR:
ipu04131
]
Autophagy
ER-phagy
ER-phagy recepters
108275893 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
108275893
NCBI-ProteinID:
XP_017342468
Ensembl:
ENSIPUG00000022352
UniProt:
A0A2D0SID6
LinkDB
All DBs
Position
15:complement(4551513..4595038)
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AA seq
646 aa
AA seq
DB search
MEKAWKVEFQNVGTSYFPQSRVECHYSISSQHSWASSDWIGLFKVGWSSVRNYHTFVWAL
APTNYKEGTDVNCCVHFQACYLPGPSAEQYQFVYVDGKGEVCSRSSAFTFSAPKPLEELM
TLEQALEGGEGSEDMLVVVPKAELLQSRLQECLKERAELLQSLEAAERSCKHERECSLRT
REVWEQRSKELEEELRHTREQMEDMKKRQEELAALSKVLQEEKQALLVKEAASEQKISQL
EDDIRVLTQKALERETDLERMKERAKKAAAQKKEIESEQTNLKLKLEQTEKELHSLSTEF
QSLRSSLAQRDTHALQLRDTITTLTHKLNNAHRKEAANEAALAELRGVQERLSGSERCVE
TLRTDIRDMAAQRDNVQADLHQARLQAAQLTLQLADANLALREARASWVQERESLQCSTE
MIRTHLDRLNDEIKQKEEQLQEERMERNKAEVELGREKDCNRVQLSETRRELQELKASLR
VAQKEKEQLQAEKKEVIEYIHQLEQRLETLSGSKWSMTALLQSSQADSSLSESEDENPEA
LRPLSHYSLCEQHQADPDLLLILPTTPPPSPRLLHSSQAVVISQPAPLCSPHQPSDDTHP
HVHSSESEEEYELFQSGGNSSGEELALLLPNHRNTILSEVEESPLW
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagcatggaaggtggagtttcagaacgtgggaaccagctacttcccacagagc
agagtggaatgccactacagcatcagttctcagcacagctgggctagcagtgactggatc
ggcctgtttaaggttggttggtcatctgtgaggaactaccatacatttgtgtgggctctg
gctccaaccaactacaaggaagggactgatgttaactgctgtgtccacttccaagcttgc
tatttgccaggccccagtgctgagcaataccagtttgtgtatgtggatgggaagggcgaa
gtgtgctcccgcagctctgctttcactttctctgctccaaagccactggaggagctgatg
actctggagcaagccctggagggaggtgaaggcagcgaggacatgctagttgtcgttccc
aaagccgagcttctgcagagccggctgcaggagtgtctgaaagagagggctgagttatta
cagtctctagaagcagcagaaaggagctgcaaacatgagcgagagtgctcacttaggacc
agagaggtgtgggagcagaggagcaaggagctggaggaggagctcagacacaccagagaa
caaatggaggacatgaagaagaggcaggaggagttggcagctctcagtaaggttctacag
gaggagaaacaggctctgttagtaaaagaagcagccagtgagcagaagatcagccagcta
gaggacgacatcagggtgctcacccaaaaagccctggagagggagacggatctagagagg
atgaaagagcgagccaaaaaagctgcagcccaaaagaaagaaatagaaagtgaacagacg
aatctaaagctgaagctggaacagactgagaaagagctgcatagcctctcgacggagttc
cagagtttgagaagttctctggcccagagagacacgcacgccctgcagctccgagacacc
atcacaacactcacgcacaaactcaacaacgcacacaggaaggaggcagccaacgaagcg
gctttagccgagttacgtggcgttcaggagcgactgagtggcagtgaacgctgtgttgag
actctgcggactgatatcagagacatggcagctcagagggacaacgtccaggctgacctt
caccaggccagactacaggctgcacagctcaccctgcagcttgcagatgccaacctggca
ctgcgggaggctcgtgccagctgggtgcaggagagagagagtctgcagtgtagcactgag
atgatcaggacgcatttggacaggctgaatgacgagatcaagcagaaggaagagcagctg
caggaggagaggatggaaagaaataaagcggaggtggagcttgggcgagagaaagactgc
aaccgggtgcagctgagtgaaacacgaagggagctgcaggaactgaaagccagtctcagg
gtggctcagaaggaaaaagagcaactgcaggctgagaaaaaggaggtgattgagtacatc
catcagctggagcagaggctagagaccctgagtggctctaaatggagcatgacagcattg
ttgcagagcagtcaagcagacagctccctgtcagagtcagaggatgagaatccagaagca
ctaaggcctctgagccactacagcctgtgtgagcaacaccaggctgaccctgacctcctg
ctcattctgcccactactcctcctccgtctccgcgactcctccactcgtctcaggccgtg
gtgatcagtcagcccgctccactctgctccccacaccagcctagtgatgacacacaccca
cacgtgcacagttccgagtcggaagaggagtatgaattgtttcaatcaggtgggaatagc
tctggagaagagctggctctcctcctgcctaaccacagaaacactattctcagtgaggtg
gaagagagccccctgtggtga
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