Ictalurus punctatus (channel catfish): 108275897
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Entry
108275897 CDS
T04658
Name
(RefSeq) transcription factor GATA-5 isoform X1
KO
K17896
GATA-binding protein 5
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108275897
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108275897
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Motif
Pfam:
GATA-N
GATA
Zn_Ribbon_TF
DUF7573
Motif
Other DBs
NCBI-GeneID:
108275897
NCBI-ProteinID:
XP_017342477
Ensembl:
ENSIPUG00000010604
UniProt:
W5UD88
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All DBs
Position
15:complement(13204546..13212672)
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AA seq
392 aa
AA seq
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MYSSLAIPSNPSPYGHDSGNYVHAPASSPVYVPSTRVPAAVLQSLPYLQPCEPTHQTHAL
TGHHHAWPPQSAADGSSFGAGSPHAHAPSATFSYTHSPPATGGGSCGARDPASYQSALAL
SGGARGSDQYGGALMRPMGASYSSPYAYMGPDVSGSWAPGHFDSGVIGLQGRQGTLTGRR
SALDVLDEMAVEGRECVNCGSISTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQKRL
QTTSRRAGLCCTNCHTSTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKR
KPKIPKTKASGSSVSGTTSPTSHPISENASTIKSEPNIAASPYAGQTVVSVTQASTPLSS
TSSGHVDIKYEDYPFTPTSIAAQNTWCALSQA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtactcgagcttggccataccttcaaacccatccccgtacggccacgactccgggaac
tacgtgcacgcaccggccagctctcccgtgtatgtgcccagcacgcgtgtgcccgccgcc
gtgttgcagtcgctgccctacctgcagccgtgcgaacccacgcaccagacgcacgcgctc
acgggccaccatcacgcatggccaccgcaatctgctgctgacggctcgtcgtttggcgct
ggaagcccgcatgctcacgcgccctccgccactttctcctacacacacagtccgcctgcg
accggcggtggtagctgtggcgcccgcgaccctgcgtcctatcaaagtgcactggcgttg
agtggcggcgcacgcggctccgaccagtacggtggtgctctgatgcgccccatgggcgct
tcttattcgagcccatacgcgtacatgggccccgacgtaagcggatcatgggcgcctggt
catttcgacagcggtgtgatcggactacagggacgccagggaactctgacgggcagaagg
tctgctctagatgtgttggatgaaatggcagtggagggacgcgagtgtgtgaactgcggc
tccatctcaactccgctgtggagacgcgacggaaccggccattacctgtgcaatgcctgc
ggcctctaccacaagatgaacggcatcaatcggcctctcatcaaaccccagaaacgactg
cagactacatcccggcgggcaggcctgtgttgcactaactgtcataccagcacgaccaca
ctgtggaggagaaatgcagagggggagcctgtatgtaatgcctgtggcctctacatgaag
cttcacggggtacccaggccactggctatgaagaaagaaagcattcagacaaggaaacgc
aaacccaagatacctaaaactaaggcttcagggtcttctgtgtccggcactacctctcct
acctctcatcccatttcagagaatgcttcaacaataaaaagtgaacccaatattgctgcc
tcaccatatgccggtcaaacagttgtgtctgtcacacaggcttcaacaccgttaagcagc
acaagttcgggccatgtggacatcaaatacgaggactaccctttcacgccgacatccatc
gccgcacagaacacctggtgcgcactgtcccaagcatga
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