Ictalurus punctatus (channel catfish): 108275958
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Entry
108275958 CDS
T04658
Symbol
eif4g3b
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3 isoform X1
KO
K03260
translation initiation factor 4G
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108275958 (eif4g3b)
03012 Translation factors [BR:
ipu03012
]
108275958 (eif4g3b)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108275958 (eif4g3b)
mRNA cycle factors
Stress granule specific factors
108275958 (eif4g3b)
Translation factors [BR:
ipu03012
]
Eukaryotic type
Initiation factors
eIF-4
108275958 (eif4g3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
108275958
NCBI-ProteinID:
XP_017342624
Ensembl:
ENSIPUG00000020618
UniProt:
A0A2D0SIU3
LinkDB
All DBs
Position
15:16732546..16779320
Genome browser
AA seq
1707 aa
AA seq
DB search
MSLSQKAVPKSAAPAGPGPGPANSSQLRTPLATVPLPGPPLAQQPPPVPPTQVFLNALHP
RIPRVQPPPLDERIFSTQPGVAAVYSVQRPPGPPYTAHEISKGHPNLAATPPGHASSPGL
SQVSVSTVSTAHLYGHPKAWEAGGGSPYTAGQNAGTAPLVYSPQTQTMNVPPQSRPFAPG
PRPTHHQFFQRTQMQPPRPSIPSNSPSIRPASQAPNATVYSPSPPIMMSMTPMPFASPQA
AQYYIPQYRHSAPPYVGPPQQYSVQPTGPSTFYSGPTPGDFPTAYAAGTQYYPGQAMYTP
SPSIIVPTPQQPPPAKREKKTIRIRDPNQGGRDITEEIMSGVGGSRNPTPPVGRPSSTPT
PPQQLNQVVEHGHVIYNVDSAQVLPAPVDLKPDDKPKLESAVQKSPSPGLRTVEPPVQRR
EPSSPVPDPHPPEKSELPPSDPEVAQSVVPASVPSLSPSKPISAVDAAEKPTPPAEPIPA
QAVTPEPDKPEPVQVPPEVPASAAQAVKAVNGLAESDAAPPHDVSDFLSLSHSSTEPSTI
LENYSLDVKAPSPPALEIDSSGTMTPSLPTVITAAAVAVRAVPTPPPGLTHPSQAPVEAG
PAQTALTGPENRDAGKEAEVALEEKVEHTLQSNVRQSSSQSQVASSVPKTWKKPKEDALV
EQAQCSDREDKPEPAIEATVENSSLSSVAVEHRSSAETPVEENGEQEAEPLKNGPEHSSE
AESSDGVLTPALEEPNSNTIQKPELKNGKRQYNRDFLLGFQFMPACVQKPDGLPPISDVV
LDKINQNKLPLRPDPRGLISRGPDFTPAFADFSRLIPAGRGAPLLNVSLRRPPPRKIIMN
VSVNDEVQLKKSENAWKPGLKRENPAEDPETQRTQDLFRKVRSILNKLTPQMFSQLMKQV
TDLTIDTEERLKGVIDLVFEKAIDEPSFSVAYGNMCSCLATLKVPMADKPNSTVNFRKLL
LNRCQKEFEKDKVNDDVFEKKQRELEAAASATERDRLQEELEEAKDKARRRSIGNIKFIG
ELFKLRMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLDFEKAKPRMDQYFNQME
KIVKERKTSSRIRFMLQDVIDLRLHNWVSRRADLGPKTIEQIHKEAKIEEQEEQRKVHQQ
LLSKDKRRPVIQREETWNTVPVPKNSRTIDPNKIPKITKSTIDDKIQLGPLGRAQLNWMK
GSSGGAGAKASESDILRPSSLNRYSPLQPSVPASASTPSASPDIDSRGGLSSRGSSGRER
NDKPLTLGPSRSGPPSVGGTAKEAAEELPQEEIPKDTHVPDTPKPQPSTASRSKLERSQS
RESVKLEAMPGPTTDKPVLSEEEMEKRSKSIIDEFLHINDYKEAMQCVDELEQATMLYVF
VRVGVESTLERSQITREHMGQLFHQLLQAGSLSKSQFFKGFSETLEIADDMAIDIPHIWL
YLAELVNPVLREGGISMRELFSEFSKPLLPVGRAGILFSEILHLLCKQMSHRKVGALWRD
SGLRWADFLPETEDVHSFITEQKLDFTLSDCSSPPDMAFTRTLSPEELNKQLEKLLLEDV
ASDEQIFDWVEANLDESEMSSPPFLRALMTAVCKAAVKWESSSCRVDTAIIQKRLPVLHK
YLNSDTERQLQALYALQALIVKLDQPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEQ
QGKGVALKSVTAFFTWLREAEEESEDN
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtcgcagaaagcggtgccgaagtcagccgctcctgccggacctggacccggg
ccggccaactcctctcagctgcggactccgctagccacagtgccgcttccggggccgccg
ctcgcccagcagcctcctccggtaccaccaacgcaagttttccttaatgcgttgcacccc
aggatccccagagtgcagccgccgccgctggacgagcgaatcttctccacacaacctggc
gttgctgccgtctacagtgtccagagaccccccggccctccttacacagcccatgaaatc
agcaagggacacccgaaccttgcggccacaccgccgggccacgcctcctcacccggcctt
tctcaggtatcagtttccacagtatccactgcgcatctgtatggccaccctaaagcctgg
gaggcaggaggagggtcgccgtacacggcgggtcagaatgccggtacagccccgctggtc
tactcaccacagacgcaaacaatgaacgtcccacctcaaagccgcccgtttgccccaggg
cctcgtcctacccatcaccagtttttccagaggactcagatgcagccgccgcgaccctcc
attccaagcaacagcccttcgattcgacctgcatctcaggccccaaatgccactgtctac
tcgccgagcccacccatcatgatgtccatgacgccgatgcccttcgcttccccccaggct
gcccagtactacataccccagtatcgccacagtgctcctccatacgtggggcctcctcag
cagtactcggtccaacccacaggacccagtaccttctactctggacctactcctggagac
tttcctacagcatatgctgcggggactcaatactatcctggtcaggccatgtacaccccg
tctccatccataatagtgcctacaccgcagcaacctccacctgccaagagggagaagaaa
acaatccgtatccgagaccctaaccagggcggcagggacatcacagaggagatcatgtca
ggagtgggtgggagtcgaaaccccactccgccagtgggacggccctcctccacccctact
cctccacagcagctgaaccaggtagtggaacatgggcatgtcatctataatgtggacagt
gcccaggtcctccctgctcctgtcgacttgaaaccagatgacaagccaaagcttgagagt
gctgtacaaaaatctccatctccaggactgcgcaccgtggagcctcctgtgcaaaggcga
gagcccagcagccctgtccctgacccacaccccccagagaaatcagagcttcctccctca
gacccagaagtggcccagagtgtagttccagcctcagttccctctctcagcccctccaag
cccatctcagcagtggatgcagcagaaaagcccacccctccagcggagcccattcctgca
caagctgtcacaccagagccagataaaccagagcctgtgcaagtgccaccagaggtgcca
gcttctgcagcacaggctgtaaaagccgtcaatgggctagctgaatcggatgccgctcct
cctcatgacgtctccgattttctgtccctgtcccattcatccacagagcccagtactata
ctggagaactacagtttagatgtaaaggctccaagtcctccagctttggaaattgattct
tcaggcactatgaccccttccctgcccactgtcatcactgctgctgctgttgctgttaga
gctgttcccacacctcctccaggtctcactcatccaagccaggctcctgtagaggcaggt
ccagcccagacagccttaactgggccagagaacagagatgctggaaaagaggcagaggtt
gccctggaagagaaagtggagcacacattacaatccaacgttagacaaagttcaagtcaa
agtcaagttgcatctagtgtaccaaagacctggaaaaagccaaaagaggatgctcttgtg
gagcaggcccagtgttctgacagagaggataagcctgagccagccatagaagctacagtg
gagaattccagcctgtcatctgtggctgtggagcatcgatcttcagcagaaacaccagta
gaagagaacggagagcaggaagcagagccgctgaagaatggacccgagcacagctctgag
gctgaaagcagcgatggagtcctcacacctgcacttgaagagcccaacagcaacacaatt
cagaaaccagagctgaagaatgggaagaggcagtacaatagagactttctattgggcttc
caattcatgcctgcctgtgtgcagaagccggatgggcttccacccatatctgatgtggta
ctggataagataaaccaaaataagcttcccctgcggccggacccacgggggctcatctcc
agaggcccagacttcaccccagcttttgcagactttagtagactcattcctgcagggaga
ggagcaccgcttctgaatgtaagtctgagacgccctcctccccgcaagatcatcatgaat
gtgtctgtgaacgatgaggtgcagctgaagaagtctgagaacgcctggaagcctggcttg
aagagagagaaccccgcagaggacccggagacccagagaactcaggatcttttccggaag
gtgcgcagtatccttaacaaactgacaccacagatgtttagtcagctgatgaagcaggtg
acagatctcaccatcgacacggaggagcgccttaagggcgtcatcgacctggtttttgag
aaagccattgatgagcctagcttctctgtagcgtatggcaatatgtgtagctgtctggct
acgttaaaagtgcccatggcagacaagcccaacagcactgtgaatttccgaaagctgctg
ctaaaccgctgtcagaaagagtttgagaaggacaaagtgaatgacgatgtctttgaaaag
aaacagcgggaactggaagcagctgcctcagccactgagcgtgacaggctacaggaggag
ctggaggaggctaaggacaaagcccgcagaaggtccattggtaatatcaagttcatcggg
gagctatttaagctgcgaatgttgaccgaggccatcatgcatgactgtgtggtgaaactg
ctgaagaaccacgacgaggaaagtctcgagtgcctctgtaggctcctcacgaccattggc
aaagatctggactttgagaaggccaagccacgaatggatcagtactttaaccagatggaa
aaaatagtgaaggagaggaagacttcatcacgcattcgtttcatgctccaggatgtaatt
gacctgcgcctgcacaactgggtatcacggagagctgatctcgggcccaagaccattgag
cagatccacaaggaggccaaaatcgaggagcaggaagagcagaggaaagttcaccaacag
ctgctatccaaggacaagaggagaccagtaattcaaagagaggagacctggaacactgtg
cctgtgcctaagaacagtagaacaatagaccccaacaagatccctaaaatcaccaagtca
acaatagatgataagattcagttgggaccattgggacgagcacagctcaactggatgaag
ggcagcagtggaggagctggagccaaggccagtgaatcagatatcttgcgccccagcagc
ctgaaccgttactcaccgcttcagccctcagtcccagcttctgcctccactccatctgcc
tcccctgacattgactctagaggaggcctgagcagtcgtggaagctcgggacgggaacgc
aacgataaaccattgactttgggtccttcgcggtctggccctccgtctgtgggcggaaca
gcgaaggaggctgctgaggagcttccacaggaagaaattcccaaggacacgcacgtccct
gacacgcccaaaccgcagcccagcacagctagcagaagcaagctggagcgcagccaatcc
agggaatctgtaaaacttgaagcaatgccaggccctactacagacaagcctgtgttatca
gaggaggagatggagaaacggtccaagtccattatcgatgagtttttgcacattaatgat
tacaaggaggccatgcagtgcgtggacgaactggaacaggccacaatgctatatgttttt
gtgcgggtgggtgtggagtccacactggagaggagccagatcacgcgcgaacatatgggc
cagctgttccatcagctgctgcaggctgggagcctctccaaatctcagttctttaaaggg
ttttcagaaacccttgagatagcagatgatatggccattgacattcctcatatatggctg
tacttagcggagctagttaatcctgtgctccgggaaggaggaatctctatgagagaatta
tttagtgaatttagcaaaccattactccctgtgggaagagctggcatattattttctgaa
atattgcaccttctatgcaaacaaatgagccataggaaagtgggggccttatggagggac
tctggactgcgctgggctgacttcctccctgaaacagaggatgtgcacagcttcattact
gagcagaaactagacttcactctttctgattgctcgagtccgcccgacatggcctttacg
agaacactctcacccgaagagctgaacaaacaacttgaaaaactcctcctggaggatgtg
gctagcgacgaacaaatcttcgactgggtagaggcaaatctggatgagtcggaaatgagt
tcaccacccttcctcagagctctgatgactgctgtgtgtaaagcagcagtcaaatgggag
agttcctcctgtagagtggacacggccattatccagaagcgtttgcctgtattacacaag
taccttaactcggacacggagagacagttgcaagcactttacgcacttcaagctctgata
gtgaaactggaccagcctccgaacttgctccgtatgttctttgactgtttgtatgatgag
gacgtaatatcggaggacgcgttctacaagtgggagaccagcaaagacccggctgaacaa
cagggcaaaggagtagcgctcaaatccgtgactgccttcttcacgtggctgcgagaggct
gaggaggagtcggaggacaattga
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integrated database retrieval system
