Ictalurus punctatus (channel catfish): 108275968
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Entry
108275968 CDS
T04658
Name
(RefSeq) DNA mismatch repair protein Mlh3
KO
K08739
DNA mismatch repair protein MLH3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108275968
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ipu03400
]
108275968
DNA repair and recombination proteins [BR:
ipu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108275968
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
108275968
NCBI-ProteinID:
XP_017342656
Ensembl:
ENSIPUG00000022171
UniProt:
A0A2D0SIY0
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Position
15:complement(4365188..4374995)
Genome browser
AA seq
1145 aa
AA seq
DB search
MIRSLSKEVQSQLRSGIAIFSLQQCVEELLLNSIDAGATCVAVKIDIEACKVQVIDNGSG
MDRENMERVGIRYCTSKCGSVEDLDNLCFYGFRGEALASMATMATMVEITSRTKMSVKTF
VKRFHESKVSDVFEAETTRPSAGTTVLICNIFHNMPVRRKRMDSVLEVERVRQRVEAISL
MHPSVSFTVKRDCSDTLLVQLPKARNTYYRFVQIHGLNRAQKLGEVNYTFGQFEMTGHVG
REGHYNNSLQFLFVNRRLLLKTRLHKLLSCLLRRLSTAQTSNPNMSAVISSPKQKGNADL
HGVYIINIKCPYSDYDVCLEPAKSLLEFKDWDSVLLCIEEGIKVFLTKENLVSECSVSDI
QNFRNKESSPGGNVNIEDTGRLPVPEKTDIGQDEEMPEPVQLNTGSKTNSDSDPEKEVAN
NDAVDEPLQKMVENDNKTQYTDMNDNTSPLCVSNNKITHCENSRIAVTDHKVEYDSLRRF
AEPNLSCAPKRKLTDGCDYGTKITRVTPHRKLTLSFETGSLDKFKRMFGKEVGTKPQTTN
TQIPDVLCPTDSFDSSALNASINFICSDSMPVDDVGGERSLFTDHSVFKTFQCSSASKRN
RISLATKLSRKVEHEDTKHMLNNDTSANPVTQDTDSIGKFPNSLSVTVNNGTFSNHSVIA
EESITSELHEDDRSDEPTFTAPNGQEMSTRTSTSTTEDTELTQNTTSPKPDNPRGQIVDT
ASQHDLLPSKTGNEEQTANESRAHESDGTKPVSSDWLTHYDDSLGKLVYINQVTGLSKYE
NPSLKETRVPCSANLTNMAVSVVSKTGCEYRCYPFQTDLVLPFLPKPRAERVRSPSIENE
GPSSLSTLYSEWNNPVFVRPPQVAVDVTSGQAEGLAVKIHNILFPYRFTKEMIHTMKVIH
QVDKKFLACLINATDQNMAASSENEGNLLVLVDQHAAHERVRLEGLVRESHEEDPDTPGK
KRLCASSVSPPLEIHMTEEEIRLLRLYQLYLRDQALEISFPQTEQSYVLVERLPVCFVEK
ENTEKRRGRRSVIKSIAEEYLREHIEALQSTGRVKGTLPLTVHSVLASQACHGAIKFNDE
LSKEECCSLVASLSSCQLPFQCAHGRPSILPLADLLHLEDEQDLPKPNLRKLRRMYKAWQ
LYGKN
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaagtctgtcgaaagaagttcaatcacagttgcgctctggaattgccattttc
tcattgcagcaatgcgtggaggagctcctactgaacagcatcgacgcaggagcaacatgt
gtggctgtgaagatagacatagaggcctgcaaagttcaggtcatagacaacggctcaggc
atggaccgagagaacatggagagggtcgggatcaggtattgcacgagcaaatgcggctcc
gttgaggatttggataacctttgcttttatgggttcagaggagaggcgcttgccagcatg
gccaccatggcaaccatggtagaaatcacctctcgaaccaagatgtctgtgaaaacattt
gttaaaaggtttcacgaaagtaaggtgtctgatgttttcgaggcagagactactcgccca
tcagccggaacaacggtgctaatttgtaacatctttcacaacatgccagtcaggagaaaa
aggatggactctgtgctggaggttgagcgtgttcgtcagagagtggaggccatatcgctg
atgcatccctctgtgtcatttactgtaaaaagagattgttcagacacacttctggtacaa
cttccgaaagccaggaatacgtactacaggtttgttcagatacatggtttgaatagagcc
caaaagctcggagaggtgaattacacgttcggacagtttgaaatgacggggcatgtcggc
agagagggacactacaacaacagcctgcagttcctctttgtgaacagacgacttcttctg
aaaacacgtcttcacaaactactcagctgtcttctcaggagactgagtactgcccaaacc
agcaatccaaacatgtccgctgtcatctcaagccctaaacaaaaaggcaacgctgattta
catggagtttacatcattaatatcaagtgtccctattcagactatgacgtgtgcctggag
ccagcgaagagtcttctagaattcaaagactgggatagtgtgctcttgtgcatcgaggaa
ggcataaaagtgttccttacaaaggagaacttggtatcagagtgttctgtgagtgacatc
caaaactttaggaacaaggaaagcagtccaggagggaatgtaaatattgaagacacagga
aggttaccagttcctgaaaaaacagacattgggcaagatgaggagatgcctgaaccagtg
caattaaatactgggtctaaaacgaattcagattcagaccctgaaaaagaagttgcgaac
aacgatgctgttgacgagcctttgcagaaaatggttgaaaatgataataaaacacaatac
actgatatgaatgacaatacttcaccactttgtgttagcaacaataaaataacacattgt
gaaaattccaggattgctgtcactgaccataaagtggaatatgacagtttgaggagattc
gctgaaccaaatctcagctgtgcaccaaagagaaagttgaccgacggctgcgactacggc
acaaagatcaccagggtcacgccgcatcgcaaattaacactgtcctttgaaactggatct
cttgacaaattcaagaggatgtttggaaaggaggttggaacgaaaccccaaacaacgaac
acacaaatcccagatgtattatgtccgacagactcttttgacagttctgctttgaacgcg
agcattaatttcatctgttctgacagtatgccagtagatgatgttggaggagaacgctct
ttgttcacggaccattctgtcttcaagacgtttcagtgttcctcagccagcaagaggaac
agaatatcgttagcgacaaagctctctcgcaaggtagaacatgaagatacaaaacatatg
ctcaacaatgacacatcggctaaccctgtaacacaagatacagactcgatagggaagttt
cccaattctctttcagtgactgtgaacaatggcactttttcaaatcacagtgttatagct
gaggaatccataacgtctgagctgcatgaggatgaccgttcagatgaacccacattcact
gctcccaatggacaggaaatgtcaacaaggacttccacctctaccaccgaagatactgag
ctcacacaaaatacgacttccccaaagcccgataacccccgaggtcaaatagttgacact
gcatcacagcatgacctactgccctccaaaacaggaaatgaggagcagactgcaaacgaa
agccgggcccatgagagtgatggaacgaagcctgtatcaagtgactggctgacacattac
gatgattcattgggaaagttggtctacatcaatcaagtgacgggactcagtaaatatgag
aatccatcactgaaagagactcgagtgccgtgctcagcaaacctcaccaacatggcagtc
agtgttgtttcaaagaccggatgtgagtacagatgctacccttttcagacagatcttgta
ctgccctttctccccaaacctagagcagagagagtccgtagccccagcatagagaatgaa
ggtcccagttccctatcgactctttactcagagtggaataaccctgtgtttgtacgacca
cctcaggttgccgtggatgtgacaagcggccaagctgaaggccttgctgtgaaaatccac
aacattctcttcccttatcgcttcactaaggaaatgattcacacgatgaaggttattcat
caagtagacaagaaatttcttgcctgtctcattaatgctacagaccaaaatatggcagcg
tctagtgaaaatgaaggaaaccttcttgtactggtcgatcaacatgcagctcacgaaagg
gttcgcttggaggggcttgtgagggagtctcatgaggaagacccggacacaccaggtaaa
aagagactgtgtgcatcgagcgtaagtccacccctggagatccatatgactgaggaagag
ataagactgctgaggttgtatcagctttacctaagagaccaggctctagaaataagcttc
cctcagacagagcagtcgtatgtgctcgtggagcgactccccgtgtgtttcgtagagaaa
gagaacacagaaaagcgccgtggcagacgcagtgtgatcaagtctatcgcagaggaatac
ttacgagagcacattgaggctctgcagtcaacaggaagagtaaaaggcactttgcctcta
acagtccacagtgtccttgcttcacaggcatgtcatggagcaattaagttcaacgatgag
ctgagtaaagaggagtgctgcagtctggtggcatctctctcgtcctgtcagcttcccttt
cagtgtgcgcacggacggccctccattcttcctctagctgaccttctccacttagaggat
gaacaggacctccccaaaccaaatctcaggaaattgagaagaatgtacaaggcatggcaa
ctttatggaaagaattaa
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