Ictalurus punctatus (channel catfish): 108275975
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Entry
108275975 CDS
T04658
Name
(RefSeq) transcription elongation factor A protein 2
KO
K03145
transcription elongation factor S-II
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ipu03021
]
108275975
Transcription machinery [BR:
ipu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108275975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DBD_Tnp_Mut
Auxin_repressed
DUF4175
AIM3
DUF2357
Motif
Other DBs
NCBI-GeneID:
108275975
NCBI-ProteinID:
XP_053542073
Ensembl:
ENSIPUG00000010069
UniProt:
A0A9F7TNR3
LinkDB
All DBs
Position
15:12350010..12384999
Genome browser
AA seq
305 aa
AA seq
DB search
MAKDQEVERIAKKLDKMVHKNNTDGAMDLLRELKNMKMSLETLQSTRIGMSVNAVRKQSS
DEEVQTLAKSLIKTWKKLLDGSEGKSEEKKKGIPPLQSSSSKDSPGSSDFSKKPEMPKTP
TTPTTPTTPKMTSFPPPPVTTDSVRNKCRELLVSALQVDDDFKTIGADCEALAAEIEDCI
YKEFKSTDIKYKTRLRSRISNLKDQKNPDLRRNVLCGTISPERIATMTAEEMASAELKEI
RKALTKESIREHQLSKVGGTETDMFVCGKCKGKSCTYTQVQTRSADEPMTTFVMCNQCGN
RWKFC
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagatcaagaagtcgagcgcatcgctaaaaagctggacaaaatggtgcacaaa
aacaacacggatggcgctatggaccttttaagggaactgaagaacatgaagatgtcacta
gagaccctgcagtccacccggattgggatgtctgtgaatgctgtgaggaagcagagttca
gatgaggaggtacagactctggccaagtctctcatcaagacctggaagaaactacttgat
ggttctgagggtaagtcagaggagaagaaaaagggaataccacccctccagtcatcttca
tcgaaagacagtcctggatccagtgacttcagtaagaaaccagagatgccaaagactccc
accacccctacaactcccacaacccctaagatgacctcgtttccccctcctccagtaacc
actgacagtgtacgcaataaatgcagagagctgcttgtctcagccttgcaggtggatgat
gacttcaaaacaattggagcagattgtgaagctttggcagcagagattgaagattgcatc
tacaaagaatttaaatccactgacataaagtataagactcggttgaggagccgcatctcc
aacctgaaagaccagaagaatcctgacctgcgccgcaatgtgctttgtggcaccataagc
cctgaacgcattgccaccatgactgcagaggagatggcaagtgccgagctgaaagagata
aggaaggcgctaactaaagagtccatccgggagcaccagctctctaaagtaggcggcact
gagactgatatgtttgtttgtggaaagtgcaagggcaagagttgcacctacacgcaggtt
cagactcgcagtgctgatgaacccatgaccacatttgtgatgtgcaaccaatgtggcaac
cggtggaagttttgttaa
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