Ictalurus punctatus (channel catfish): 108276045
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Entry
108276045 CDS
T04658
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276045 (ccdc187)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Other autophagy associated proteins
Others
108276045 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
108276045
NCBI-ProteinID:
XP_017342808
Ensembl:
ENSIPUG00000022160
UniProt:
A0A2D0SJC7
LinkDB
All DBs
Position
15:19074102..19105433
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AA seq
744 aa
AA seq
DB search
MAELEVDQSNLPRVQEVSQYFSVLEDGALAHNLQEQEIEQYYSSNVQRNQLVQKDIRVAK
RLQDEEQQRAQVLHDQATRQLEEQDSEYARRIQEEIQCAAEEERRRQEEDEEIAKQIQEE
EELYVRQRYSCRRTDGGENGSTIGSPNTFQPSRPLFSEEEELAWQSREHPPSPSSSDYET
DYCERTRPFNREHADHVEQRHQPRRELPLRRRSGQSRSSFASQSSTTGHHLRGWGNVVQL
IKNDLSEQGYLSYSSEELFEPVYKLERILSRHQQASERGREQGTRLCRPSSMREGNSRMW
QGDQVGRMERYRHSNYKDGVSMRSESRLVRYYSSSDCKSGDGQRRVRFQDDQTRHDFHTD
GHRAFEENRGESRGLRSCTVRPYRGIQVDRTSFGEVNRTYRHEANGVRNSLSQEIREEEE
DRGRLRERGSWERGHYRVRAEHRPRAHSLREDRRQEGRKSRRYGGEGSRRRIRSEGWQGN
QEDRSSTEEEEVDRERERRREDTRAPRHPQRNLSASCRGRSSGAGQRVNRPSLDLGVLRQ
VLQDEELAHRLQAEEEELLRGDLASASSLERPYPKGDFTAAQVAQDEEIARFMQKQEIKT
QLRSQELDNYGSGRGYREMSHVYDNSEICDGETPRERLNSEGLLSPVDDCSPEHQPPSPV
SLAAQQHPLRNIAEELDPTFQREEKVQAGQSISGTCPIQATPQAGSCEEPAFVAPTKRQN
DKPRRTKSKEKKENSKSKENCKQQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggaggtggatcagtctaacctgccgcgggttcaggaggtgtcccagtat
ttctcagttctggaggatggagcactggcacataacttacaggagcaggaaattgaacag
tactacagttccaatgtacagagaaaccaactggttcagaaagacatccgtgtagccaag
aggctgcaagatgaggagcaacaaagagcacaggttcttcatgatcaagccactcgtcag
ctggaagagcaggactccgagtacgcccgcaggattcaagaggagatccagtgcgccgct
gaggaagagaggaggaggcaagaggaagatgaggaaatagcaaaacaaatccaggaagag
gaagagctgtatgtcagacagagatacagttgccgaaggacagatggtggagaaaatggc
agcaccatcggctcgccaaacacatttcagcctagtcggcccctcttcagcgaagaggaa
gagttggcctggcaaagccgggagcatcctccctctccttcctcctcagactatgagacc
gactactgtgaacgcacgaggccttttaatagggagcacgcagaccatgtcgagcagaga
catcagcctaggcgtgagctgcctctcaggagacgttcaggacaaagccgcagtagcttt
gccagccagagcagcacaaccggacatcatctgagaggatggggcaatgttgttcagctc
atcaaaaatgacctgagtgagcagggctatctcagttacagttctgaagaactctttgaa
ccagtctataaactggaaagaatcctgagccggcaccagcaggcatcggagcggggccgc
gagcaggggacaagactatgtcggcccagcagtatgagagagggaaacagcagaatgtgg
cagggagaccaagtgggccgaatggaaagatatagacattccaactacaaggacggcgta
agcatgagatcagagagcaggctggtgagatattacagcagtagtgactgtaaatcaggg
gacggacaaagacgtgtccgctttcaggatgaccagacacgccatgactttcacactgat
ggtcatagagcatttgaggaaaatcgtggtgaaagtaggggactaaggagttgtactgtg
agaccctatcgaggtattcaggtagacagaacatcatttggtgaagtaaacagaacttac
agacatgaggctaacggagttaggaactccttgtcacaggagataagggaggaagaggaa
gatcgtggcaggctcagagagagaggaagctgggaacgaggccactacagggttcgagca
gagcacaggccaagagcacactctctcagggaggataggaggcaggaggggagaaaaagc
agacggtatggtggagaaggtagcaggagacgtataaggagtgagggatggcagggtaat
caggaggacaggtcgagtactgaagaagaggaggtggacagggaaagggagagaagaagg
gaggatactcgagcgccaaggcacccccagcgcaaccttagtgcgtcttgcagagggcgc
tcttctggagcagggcagagggtgaacagaccctctctggatttgggtgtactcaggcag
gtcctgcaggatgaagaactcgcccacaggctacaggcagaggaagaggagttgctcaga
ggggatcttgcatctgcctcatctttagagaggccttacccaaaaggagacttcacagca
gcgcaggttgctcaggatgaggagattgcacgcttcatgcagaagcaagagataaagact
cagctgcggtctcaagagctggacaactatggctctgggcgaggttacagagaaatgagt
catgtgtatgacaacagcgagatttgtgatggagagacgccgagggagagactgaactcg
gaagggcttttgtctcctgttgatgactgctctcctgaacaccaacccccaagtccagtc
agtttagcagcgcagcagcatcccttgaggaatattgctgaagaattggatccaactttt
caacgggaagagaaagtgcaagcaggacagagtatttctggcacttgccccatccaagct
acaccacaggcaggttcatgcgaggagcctgcattcgtggcacccactaagcggcaaaat
gacaaaccaagacgcacaaagtccaaagagaaaaaggaaaactctaaatcaaaagaaaac
tgtaagcagcagtga
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