Ictalurus punctatus (channel catfish): 108276059
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Entry
108276059 CDS
T04658
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
ipu04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108276059
04114 Oocyte meiosis
108276059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108276059
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108276059
Meiosis-specific proteins
Cohesin complex and associated proteins
108276059
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
ABC_tran
SlyX
Motif
Other DBs
NCBI-GeneID:
108276059
NCBI-ProteinID:
XP_017342853
Ensembl:
ENSIPUG00000015670
UniProt:
A0A2D0SJH1
LinkDB
All DBs
Position
15:24885929..24898421
Genome browser
AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRANVQLQLFKLYHNECEIEKLNR
ELAQRNKEIDKDRKRMDRVEEELKEKKKELGRMMRDQQTVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKADMDELEREQRAVETARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPQIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREMKELKDRMNLVEDEVFLEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVIMWEQ
TVKKDESEIERLKKEEQRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLRSGTMDDISQEEGSSQEE
SLSSSQKTSSTVLAKEALIEIDYSSLSEDLKDSLSEDEIKGEMNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNACFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaagttaatcgagatagaaaatttcaaatcgtacaaaggaagacagata
atcgggccttttcacaagtttactgcgattattggaccgaatggatcagggaagtcgaac
ctcatggatgccatcagctttgtgctggcggagaaaaccagcaacctgcgtgtgaaaacg
ctgaaagatctgattcacggcgccccggtggggaaacccgcggctaaccgggccttcgtt
agcatggtgtaccaggaggacaacggcgaagagcgctccttcaccagagtcatcatcgga
tcctcgtcggagtaccgcattaatagtaaagtcgtggggttgccagagtacagcgaggag
ttggagaaactcggaatactcatcaaagccaggaacttcctggtctttcagggtgcagtg
gagtccatcgccatgaagaaccctaaggagcgaacagccctgttcgaggagatctctcgc
tccggtgagctggctcaggagtacgaccggcgcaagaaggagatggtgaaggctgaggag
gacacgcagttcaactaccaccgcaagaagaacatcgcagctgagcgcaaagaggccaag
caggagaaagaagaggccgagcgctaccagaggctaaaggacgaagtcgtgcgtgcgaac
gtccagctacagctcttcaagctctaccacaacgagtgcgagatagagaaactgaaccgc
gagctggcgcagcgcaacaaagagatcgacaaagaccgcaagcgcatggaccgtgtggag
gaggagctgaaggagaagaagaaggagctcggccggatgatgagagatcagcagaccgtc
gagaaagagatcaaagaaaaggacgcagagctaaaccagaaaaggccgcagtacatcaag
gcgaaagaaaacacggctcacaagatcaagaagctggaggccgcacggaaatccctgcag
aacgcccagaagtgctacaagaagcgcaaggcggatatggacgagctggagcgcgagcag
agagccgtggagacggccaggcaggagttcgaggagcgcatggaggaggaggcgcagagc
cagggccaggacctgcagctcgaagagaaccaggttaaagcgtatcaccgtctgaaagaa
gaggctagcaagcgagccgctactctggcacaggagttggagaagtttaaccgcgatcag
aaagctgaccaggaccgcctagacctggaggagaggaagaaagtggagacggaggctaag
atcaagcagaagatccgagagatcgaggagaaccagaagcgtatcgagaagctcgaggat
tacatcactaccagcagacagtctctagatgaacagaagaggatggaggaggagctcaca
gaggaggtggagcaagccaagaggaggatcgatgagattaatatggagcttaaccaggtg
atggagcagctcggtgacgctcgtatagacagacaggagaacagcaggcagcagcgcaaa
gccgagatcatggagagcatcaagagactctatcccggatcagtgtatggaaggctcata
gacctgtgccagcccactcagaaaaagtaccagatcgccgtaaccaaagttctgggcaaa
aacatggacgccatcatcgtggactcggagaagaccggacgtgactgcatccagtacatc
aaagagcagagaggagaacctgaaaccttcttacctctggactatctcgaggtcaaaccc
acggacgagaagctgcgcgagctgcgcggtgccaagctggtgatcgacgtcattcgctac
gagcctccacagatcaagaaagctctgcagtacgcctgcgggaacgcgctcgtgtgcgag
aacgtagaggacgcccgccggatcgctttcggaggaccgtacaggcacaagaccgtggct
ctagacggaacactgttccagaagtccggtgtgatctctggaggcgcgagtgacctgaag
gccaaagctcgccgctgggacgagaaagccgtggacaagctgaaggacaggaaggaaaaa
ctcaccgacgagctcaaggagcaaatgaaggcgaaaagaaaggaggcggagcttcgtcag
gtgcagtctcaggctcacgggctgcagatgaggctgaagtactctcagagcgacctcgag
cagaccaaaactcgccatctgtccttaaatatgcaggaaaaatccaagctagagagcgag
ctggccaactttgggccccgtatcaacgacatcaagaggatcatccaatcacgtgagaga
gaaatgaaggagctcaaagaccgcatgaacttggtggaggacgaagtgttcttggagttc
tgcaaggagatcggcgtgaggaacatccgtgagtttgaggaggagaaagtgaaacggcag
aatgagatcgcaaagaagcgcttggagtttgagacccagaagactcgcctagcgatccag
ctggattacgagaagaaccagctgaaggaggaccaggagaaggtcatcatgtgggagcag
acggtgaagaaggacgagagcgagatcgaaagactaaagaaggaagagcagaggcacatg
aagatcatcgatgagaccatggctcagcttcaggacttgaagaatcagcacctcaccaag
aagtcggaggtcaacgacaaaaaccacgaaatggaagaaatccgtaagaaactcggtgga
gccaacaaagagctgacacagcttcagaaggaggtcacggccattgagacgaagctggag
cagaagcgcagcgacagacacaacctgctgcaggcctgcaaaatgcaggacatcaaactt
cctctcagatcaggaaccatggacgacatcagccaggaggagggaagttctcaggaagaa
agtctgagcagcagccagaaaacatccagcaccgttttagccaaagaggctctcatcgag
atcgactacagcagcctgtctgaagacctgaaggactctctgtcggaggatgagatcaaa
ggcgagatgaacacccttcagcagaggcttaacgagcagcagagcatcctccagaggatc
agcgctcccaacatgaaggccatggagaagctggagagcgtccgagacaaattccaggag
acgagtgacgaattcgaggccgctaggaagagagcgaagaaagccaagcaggcgttcgag
cagatcaagaaggagcggttcgatcgcttcaacgcctgcttcgagtccgtcgccaccaac
atcgacgagatctacaaagcactctcgcgcaacagcagcgctcaggctttcctcggaccg
gagaacccggaggagccgtacctggacgggatcaactataactgcgtggctcctgggaaa
cgtttcagacccatggacaatttatcaggaggagagaagaccgtcgccgctctcgcgtta
ctcttcgccattcacagctataaacctgctcctttcttcgtgctcgacgaaatcgacgcg
gctctggacaacaccaacatcggcaaggtcgctaactacattaaagaccagtccgtccag
aacttccaagccatcgtcatctcgctgaaggaggagttttacaccaaggccgactcgctc
atcggcgtgtatcccgagcaaggagactgcgtgatcagtaaggtcctgacctttgacctc
tcccagtatccagacgcaaaccctaaccctaacgagtaa
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