Ictalurus punctatus (channel catfish): 108276120
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Entry
108276120 CDS
T04658
Symbol
chl1a
Name
(RefSeq) cell adhesion molecule L1-like a
KO
K06758
L1 cell adhesion molecule like protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108276120 (chl1a)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
L1 family
108276120 (chl1a)
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GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_5
Ig_6
FN3_DSCAM-DSCAML_C
C2-set_2
Fn3_VIN3
Peptidase_M20
Motif
Other DBs
NCBI-GeneID:
108276120
NCBI-ProteinID:
XP_017343000
Ensembl:
ENSIPUG00000008245
UniProt:
A0A2D0SL39
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Position
15:11355951..11396813
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AA seq
1134 aa
AA seq
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MRGLRGFDAGLLFNFFSIAFSLHVPYEVEQPPTITAQSVRSIVAVAFDDDFTLTCEATGN
PKPVFYWTKNGLNFNPHNDSRLKIFENSGSFVIPNNKYLAEYQGKYRCYASNKLGVAVSE
ETHFIVPTPPKFPKEIVEPAVVKEGDPVVLECNPPKGIPPCFLYWMTIDLQHIEQDERVS
MGLNGNLYFSNVLDKDSRSDYCCYASFPKIRTIVQKTAMAIVVVSSNSTGETDVTISERK
PNILVPSGYLSQTYLVQGQDLEIECIAEGLPTPMTEWTKIGGKLPKRTNMKNHGKRLVIT
NVTEEDGGKYMCKAKNSAGEAVHFFDITVEEPPHWVQEPIKSQVVAIGSDVHIKCHASGN
PPPTITWMRNGEPLQTFPSSHIRVLHDTLILYGAQQNNSAVYQCEVSNKHGTLLSNANIM
VMNLPPFILTQNSINYGAVCGKSVIMDCKVFSSPPADIHWRKDGLEGSVVGDRFFLHKNG
SLQIHTTEVEDTGKYTCFAKNKFGDSLINVQLHIKDPTKILIPPQDIKINRGSMAELLCK
AQYDQSELKILWQKDGKEIDSNYTEYSRFYTDEGILQINNVSHRDEGLYTCIARTSLDQD
TASAYVTVLDVPDPPVNVTLSDLRDRSVKLHWMPTKDHNSHITEYLIEFEENHWEPGKWR
PLLRVSGHKNSAPLSLYGHINYQFRVSAVNAIGRGHPSKPSERYKTPPAAPDRNPGNIKI
EGHSPHQMDITWEPLKPIEHNGPGLEYKLSYRQMGVEESWTEKMMKRHSFVVTGTPTFVP
YEVKIQAHNNHGWAVEPIVVIGYSGEDLPIAAPENVHVEVFNSTMLHVSWSPVQQAQLRG
HLEGYSVHCWRTQSLLTSAEVPAEKQFLNLPGNQSHTIVPGLKPFSQYRLTVNVFNKKGN
GPSSTPLTFTTPQGVPESPPILRATNPQDNSITLVWAPPLEANGVLTGYKLQYQIFNDTS
DVGEVYRVNISGPDTTQWVLNDLDTASLYKFSLSACTLVGCGPAIIEEGVTISAAHAAGV
HERISSKSWFIGIMCAVALLTLVALIACFVTKNKAGKYAVKENEEVRPHLEFKGMNDETS
CEYSDSDRKPLKNSQHTLVGDIKEDSRSMDSSDDYGNEDCEFSEDGSFIGEYVG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaggggactcaggggctttgatgctgggctccttttcaacttcttttctattgccttt
agcctgcatgtaccttatgaggtggagcagccaccaacaatcacagctcaatctgtaaga
tctattgttgctgtggcatttgatgatgatttcactttgacatgtgaagctacagggaat
ccaaaaccagtgttttactggactaaaaatggcctgaactttaacccacataatgactca
agactcaaaatctttgaaaacagtggaagttttgttattccaaacaacaaataccttgca
gaatatcagggtaaatatagatgctatgcatccaataaactgggagttgcagtgtcagag
gaaacccatttcattgtacctactccaccaaagtttccaaaagaaattgtagagccagca
gtggttaaagagggagatccagttgtcctggaatgtaatccaccaaaaggcattccacct
tgctttctctactggatgactattgatcttcaacacattgaacaggatgagcgagtgtcc
atgggcttgaatgggaacttgtacttttcaaacgtgctagacaaagacagccgtagcgac
tactgctgttatgcttctttcccaaagattcgcaccatcgtccagaaaactgccatggct
attgtggtcgtgtcctcaaactcaactggtgaaacagatgtcacaatttcggaaagaaaa
ccaaatattctggtgccctctggctatctgtcccaaacatatctggtgcaaggacaggat
cttgagattgagtgtattgcagagggactccccacaccaatgacagaatggaccaagatt
ggagggaagttgccaaaacgcaccaacatgaagaaccatggaaaacgtttggttataaca
aacgtcactgaggaagatggtggaaaatacatgtgcaaggcaaagaattctgctggtgaa
gcagttcatttcttcgacattacagtagaagagccaccacactgggtgcaagagccaata
aaaagtcaagtagtggcaattggatcagatgtacacataaaatgccatgcgtcaggaaat
ccaccacccacaatcacctggatgaggaatggtgaaccgctccaaacattcccctcatcc
catatcagagtgctacatgacacactaatcctttacggagcacaacaaaataacagtgca
gtatatcagtgtgaggtctccaacaaacatggtactttactgagcaatgccaacatcatg
gttatgaatcttcctcctttcatcctgacacagaattctataaattatggtgctgtgtgt
gggaagagtgtcatcatggactgcaaagtgttcagttctccacctgctgatatccactgg
agaaaagatggccttgaaggttctgtagtaggagaccgattctttctccataaaaatggc
tccctgcagattcacacaactgaggtggaagacacaggaaaatatacttgttttgctaaa
aacaagtttggcgactccttaataaatgtacaacttcatataaaagacccaaccaaaatt
ttgatccctcctcaagatataaagatcaacagagggagtatggcagagcttctgtgcaag
gcacagtatgatcagtcagagctgaaaatactctggcagaaggatgggaaagagatagat
tccaactacactgagtattcaagattctacactgatgagggaatattgcagatcaacaat
gtgagccacagagatgaagggctgtacacttgtattgctagaacatctcttgaccaagat
acagcatctgcatatgtaactgtgctagatgtccctgaccctccagtaaacgttacatta
tcagatctgagagatcgtagtgtgaagcttcattggatgcctaccaaggaccataacagc
cacataacagagtacctcatcgaatttgaggagaaccactgggagccaggcaagtggagg
ccattgctacgagtatcaggccacaagaactctgctccactctcattatatggacacatt
aactaccagttcagagtcagtgctgtcaatgccataggcagaggtcatcccagcaaaccc
tctgagagatataaaactcctcctgctgccccagataggaatccaggaaacataaagatt
gagggtcattcgcctcatcagatggacattacttgggagcctttgaagcctattgaacac
aatggacctggcctagagtacaagcttagctacagacagatgggtgttgaggaaagctgg
acagagaagatgatgaagaggcattcttttgtcgtgacaggcaccccgacgtttgttcct
tatgaggttaagatccaggcccacaataatcatggttgggcagtggaacccattgtggtg
attggatattctggagaagatttgccaattgcagctcctgagaatgtgcatgtagaggtg
ttcaactccacgatgctgcatgtcagctggtctcctgtccaacaggcccagctcagaggc
catcttgaaggctacagtgtgcattgctggagaacacaaagcctgttgacttctgcagaa
gttcctgctgagaagcagtttctgaacctcccaggaaatcagagtcacaccatagtgcct
gggctgaagcctttctcccaataccgtctcactgtcaatgtctttaacaagaagggcaat
ggtcccagcagcacgccgctcaccttcacaacaccacagggagttcctgaaagcccccct
atactcagagctacaaaccctcaggataactccatcacactggtgtgggctccaccactt
gaggccaatggtgttctcacaggatacaagctgcagtaccagatattcaatgatacatcg
gatgttggtgaagtatacagagtaaacatcagtggaccagacactacacagtgggttcta
aatgatctggacacagcaagcctctacaagttctctctgagtgcttgtacacttgtgggc
tgtggaccagctatcattgaagagggtgtcactatttctgcagcacatgcagcaggtgta
catgagagaatttcatctaaaagctggttcatcggaatcatgtgtgcagtggcattgctc
actctggtagctctaattgcctgcttcgtgaccaagaacaaagctggaaagtatgcagtg
aaagagaacgaagaagtacgaccacatctggagtttaaaggcatgaatgatgagacttcc
tgtgaatacagtgacagtgatagaaagcctcttaagaacagccagcatacactagtggga
gacatcaaagaagacagcagaagcatggacagctcagatgactatgggaatgaggactgc
gagttcagtgaggacggatctttcattggtgaatatgttggctag
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