Ictalurus punctatus (channel catfish): 108276183
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Entry
108276183 CDS
T04658
Symbol
hoxc11a
Name
(RefSeq) homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276183 (hoxc11a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108276183 (hoxc11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108276183
NCBI-ProteinID:
XP_017343131
Ensembl:
ENSIPUG00000022376
UniProt:
A0A2D0SKX0
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All DBs
Position
15:4640375..4643053
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AA seq
307 aa
AA seq
DB search
MFNSVNLSNFCSQTRKDRTSEFGDRTGCASNIYLPSCTYYVPEFSTVSSFLPQGPSRQIT
YPYTTNLSQVQPVRDVSYGLDPSSKWHHRTNYATCYSGEDLVHRDCLPPSTMTEMLMKNE
SVYSHHHHHHHPSSNHPSTGFYSSVGKNNVLPQGFDRFFESAYCGADNQSDHCLQKSETT
KLESTSQQPSAVSGVEEPEKDAEDEEERTNSGSCSSSGTKESNASKINHSSAPRTRKKRC
PYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQY
FSGNPLL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcggtaaatctgagcaacttctgctcccagacacgtaaagaccggacatct
gagttcggggacaggacgggctgtgcctccaatatctacctccccagctgcacctactac
gtcccagaattttcaaccgtttcttcgtttcttccgcaggggccttcacggcaaattaca
tacccctacactacaaatttgtctcaagtgcaaccggtacgagatgtttcctacggcctg
gatccatccagcaagtggcaccacagaaccaactacgcgacgtgctactccggagaggat
ctggtgcacagggattgtcttccgccatccaccatgacagaaatgctcatgaaaaacgag
agcgtgtacagccaccaccaccatcaccaccatcctagctctaaccacccatctactggt
ttctattccagtgtcgggaaaaacaacgtgctgcctcaaggttttgatcgcttttttgaa
tcggcgtattgtggagctgacaaccagtcagaccattgtttacaaaagagcgagacgact
aaactagagagcacgtcccagcagcccagcgcagtttcgggggtggaagagccagaaaag
gacgccgaggacgaagaagaacgaacaaattcgggctcatgtagctcctcaggcacaaag
gagagcaacgcaagcaaaatcaaccattcgagtgccccccgcacgaggaagaagagatgt
ccatactccaagtttcagattcgcgaactggaacgagagtttttctttaacgtttacatc
aacaaggagaaaaggctgcagctatccagaatgctaaaccttactgacagacaagtgaaa
atatggtttcaaaatcgcagaatgaaagaaaagaaattaagcagagaccgcttgcagtat
ttctctgggaacccactgttgtaa
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