Ictalurus punctatus (channel catfish): 108276185
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Entry
108276185 CDS
T04658
Symbol
hoxc9a
Name
(RefSeq) homeobox protein Hox-C9a
KO
K09294
homeobox protein HoxB/C/D9
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276185 (hoxc9a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
108276185 (hoxc9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
CI-B14_5a
Motif
Other DBs
NCBI-GeneID:
108276185
NCBI-ProteinID:
XP_017343133
Ensembl:
ENSIPUG00000022389
UniProt:
A0A2D0SK99
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All DBs
Position
15:4660021..4662550
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AA seq
259 aa
AA seq
DB search
MSTTGPISNYYVDSLINHESEDVLASRFPTTAPISSGSRPTPLVPECVDYPSCSFAPKPP
VFTTSWAPGHSQSSVVYHPYTHQPHLGTDSRYVRSWLEPIPGAVSFPGYAANSRHYGLKP
DAFQDPRTTDCLASNGRTYSDYVYCSAVDIRDKQQNASSPESEIVSSGKHKDEKAELDPN
NPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWF
QNRRMKMKKMNKEKSDSKE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactacgggtcccataagtaattattatgtggattccttgatcaaccacgagagc
gaggatgttctggcgtctcgttttccgactactgctccgatatcctccggctcacgcccg
acgcctctcgtgccggagtgcgtggattatccgtcgtgcagctttgccccgaaaccacca
gttttcactacctcttgggcccctggtcattcacagtcgtcggtggtttaccacccgtac
actcaccaacctcacttaggaacggactcgaggtatgtccgctcgtggctagagcctatt
cctggtgctgtgtcctttccaggctatgcagctaacagcaggcactatgggctaaagcct
gacgcctttcaggatccccgaactacagactgtttagcttcgaacggacgaacctattcg
gattatgtctactgttcagcggttgacatcagggacaagcagcagaatgcatcttccccc
gagtctgagatcgtttcttccggaaagcacaaagacgagaaggctgaactggacccaaat
aatcccgtggccaactggatccacgcacgttccacaagaaagaagcgatgcccttataca
aaatatcaaacacttgaactcgaaaaggaatttttattcaatatgtatctaacaagagac
cggcgatacgaggtagccagagtgctgaacctgacggaacgacaggtcaaaatctggttt
cagaaccgacgaatgaagatgaagaagatgaacaaggaaaagagcgacagcaaagaataa
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