Ictalurus punctatus (channel catfish): 108276201
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Entry
108276201 CDS
T04658
Symbol
lamb2l
Name
(RefSeq) laminin subunit beta-1
KO
K06243
laminin, beta 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108276201 (lamb2l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108276201 (lamb2l)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
Motif
Other DBs
NCBI-GeneID:
108276201
NCBI-ProteinID:
XP_017343157
Ensembl:
ENSIPUG00000018324
UniProt:
A0A2D0SKC4
LinkDB
All DBs
Position
15:15702457..15755802
Genome browser
AA seq
1833 aa
AA seq
DB search
MARCLGLLVLALHSLAQEPSGPHGCTDGSCYPATGNLLIGRAVNLSSTSTCGLETPEKYC
IVSHLQESDKCFTCDSRRPYHSHHHKSSHRVENVIYLKDSREDLTWWQSVNGEENVSIRL
NLETEFHFTHLIMKFKTFRPAGMLIERSMDFGRSWRPYRYFAYNCTRTFPGVRTQSLQFI
DDVICEERYSDIEPSTEGEVIFKVLDPAIPVSNPYSPNIQDLLRITNLRINFTKLHTLGD
NLLDRRPDVLQKYYYSVYELVVRGSCFCYGHASECAPVQGVHTGYNGMIHGHCVCKHNTV
GLNCERCRDFYHNLPWRPAEANNPHTCRECNCNGHSNKCHFDMAVYLGTGNVSGGVCDNC
LHNTMGRNCERCKPFFYQDPARDIRDPHICVRCDCDPEGSLDGGQCDSHTDMYHRMIGGQ
CRCKPNVQGQRCDYCKEGHYGLSQNDPLGCQSCNCDPRGTTMMGPLCDQISGDCSCKRYV
TGRYCNQCIPEYWGLSNVLASCRPCECDFGGSYSKSCRMDNGQCDCRPHLIGRQCSDVEP
GYFCAALDYYTYEAERAVGHSPDSADLPGNPRPLAVNDCTQHLGNLLRRYRRHRHITQQQ
RVALRRIRQLQQTPDVTIAHRERYTDQMVTWTGPGFARVKDGAGLVFTIEDIPYAMEYDI
MIRYEPESTEDWEAIVSVTSVLLSTSTRCGNLLPTEQLYTVTLLHNKRHILMPQPFCFEP
SNRYGVAIRFQRHAVSHRHLTAHILADSLVLIPRYEELPGFMGNDPLAVQRREEMMRYMC
LDSFMVAPMPILADICIKLICSISSLMHNGALPCQCDPQGSLNVDCKKIGGQCQCKPNII
GRNCNQCAPRTYGFGPYGCTACNCHLDGSDAQQCDPVTGQCPCNTGAFGRQCSECQPGQW
GFPNCRPCHCNGHSETCDPHTGACLDCRDNTAGHQCERCMNGYHGNPVLGSGEHCRPCPC
PGNPGSGHSNADSCHMQHSSKQIICHCKPGYAGHRCDRCAPGYYGHPEQEEGECRPCECN
GNIVAEDPESCDPHTGECLKCLYNTDGPSCSECKPGYYGNALARDCRLCTCMRLGTDQEY
CLDKVCYCDKQTGACPCRPNVVGNNCDQCAANHWNLGMDDGCEACECHPQNSYSSHCNSI
SGQCHCRQGFGGKQCTECEPFHWGDPAVYCEECKCHWQGSVTGRCDRITGACECKEWAAG
QHCDRCTRGFIGHFPKCVPCHPCFQLWDDIVCQVKHDMDRIRFIITKILEMGEVPGVADT
RIHELERKLAEIQKLLQDGEGDRIYQLINQAIDDLRVEIAVTDGRLMGAERELNVTTEHN
NILKHNLTALEREFRDLNTTFTQWHRELENSVSGEITGLLNKVRKYYQESLDAEQRCNAS
VSGAQSPVEQSQDKRNMTEALLDQRKDKFMRNVTAQKKSLSELKKKAENMDGKVHQLSQK
VCGSSGNMSADGSCPDSPCGGVACKDSNDKLVCGGPHCNGTVGESIRALEKANDLSKNLT
AVSEDLMNMAKKLQDIATLTENVKAQAMNTLDKAQKKKELFEKSNKKLKDFIQTIRDFLT
EEGADPESIEKVAQQVLAITLPVNRTELDSIVLQIKDTIANLTDVDGVFNYSAEQLAKAK
DLLDRATNEQENAGKISDVINKTKEAMNTTQEAIEKAMTAIEKALENLNSTQSVTSMVED
KLSNLEANLMDMMMRLANLSQEVDFLKNKTEQNRQQAQEAKAVSENATQAASELTEDLSH
VESRYKELKDKIDSLGGAAPGNITQKAVDMKNEAEDLLRKANKDMETLKKLERKLQKNEQ
RMQQQRDELAELESNVTDIRNFIREKVSGYNTC
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atggccagatgtctgggtctcctcgttctagctctccatagtttggcacaggagccgtca
ggcccacatggctgcacagacggaagctgttatccagctacagggaacctcctcattggg
cgagctgttaacctgtccagcacctccacctgcggcttggaaacacctgagaaatactgc
attgttagccacctgcaggagtcagataaatgcttcacatgtgattctcgaagaccatat
cactcccaccatcacaaaagcagccatcgtgtggagaacgtcatctacctgaaagatagt
agagaagaccttacatggtggcaatctgtgaacggagaggagaatgttagcatcagactt
aatctggagacagagttccacttcactcacctcatcatgaagtttaagacatttaggcct
gcaggcatgttgatcgagcgctctatggatttcgggcgttcatggaggccataccgctat
tttgcctacaactgcaccagaacctttcctggagttcgtacccagtctctgcagttcatt
gatgatgtgatctgtgaagagcgctattctgacatcgagccatccacagaaggagaggtc
attttcaaagtgcttgatcctgcaatccctgtcagtaatccttatagtcctaatattcaa
gacctgctacgaatcactaacctgaggattaacttcactaaactccatactctgggtgac
aacctgctggatcgtcgccccgatgtgctgcagaagtattattattcagtgtatgagctg
gtggtgcggggcagctgcttctgctatggccatgcctccgagtgtgccccagtccaagga
gttcacaccgggtacaatggcatgattcacgggcactgtgtgtgtaagcataacacggtg
ggcctgaactgtgagcgctgcagagatttctatcacaatctgccctggagaccagccgag
gcgaataacccacacacttgcagagagtgcaactgtaatggccactccaacaagtgtcat
tttgatatggcggtgtatctgggcacggggaacgtcagtggaggtgtgtgtgacaactgt
cttcacaacaccatgggccgcaactgtgaaagatgtaaacccttcttctaccaggaccca
gcaagagatatccgagatccccacatctgtgttcgatgtgactgtgatccagagggttct
ctggatggaggtcaatgtgacagtcatactgatatgtatcacagaatgattggtggtcag
tgtcgctgtaagcccaatgtccagggtcagcgctgtgactactgcaaagaggggcactat
ggcctcagccaaaacgaccctcttgggtgccaatcatgtaactgtgatccacgtggcacc
accatgatgggaccattatgtgaccaaataagtggggactgttcttgcaagagatacgtg
acgggtcgctactgtaaccagtgcataccagagtactggggactcagtaatgtccttgca
agctgcagaccctgtgaatgtgactttggtggatcatacagcaaaagctgcaggatggat
aatggtcagtgtgactgtcggcctcacctcattggccgtcagtgctcggatgtggagcct
gggtatttctgtgccgctctcgattactacacatatgaagctgaaagagcagtgggccac
tctcctgatagtgctgatctgcctggaaatcctcgccctctggctgtaaatgactgcaca
cagcatctcggtaacttgctgaggagatacagacgccatcggcacatcacccagcagcag
agggtggctctgagacgcatccggcagcttcagcagacccccgatgtgaccattgcacac
agagagagatatacagatcagatggtcacctggaccgggccaggctttgctcgagttaaa
gatggcgctggccttgtgtttaccatcgaagacatcccgtatgccatggagtatgatatc
atgattcgctatgaaccggagtctacagaggactgggaggccattgtgagtgtcacgtct
gtgttactgtccaccagtactcgctgcgggaacctgctgcccactgagcagctctacact
gtcacactactacacaacaagaggcacatcctcatgcctcagcctttctgcttcgagccc
agcaaccgctatggggtggccatccgctttcagcgccatgcagtctctcacagacacctc
actgctcacatcctcgctgactcgcttgtattaatcccccggtatgaggagttgccaggg
ttcatgggtaacgatcccctggctgtgcagcggcgagaggaaatgatgcgctacatgtgt
ctggactccttcatggttgcgccaatgccgattctggccgatatatgcatcaaattgatc
tgcagcatctcctctctcatgcataatggagcattaccttgtcagtgtgaccctcagggt
tcactgaatgtcgactgtaaaaaaattggaggtcagtgtcagtgtaaacccaacataatt
ggccgtaactgtaaccagtgtgcaccgagaacatatggatttggaccctacggctgcact
gcctgtaactgccacctcgatggctctgatgctcagcagtgtgacccagttacagggcag
tgcccttgcaacaccggggcctttgggcggcagtgctctgaatgccagcctggtcagtgg
ggcttccctaactgcagaccgtgccattgtaatggacactcagagacctgtgatccacac
actggcgcatgccttgactgcagagacaacacagcaggccatcagtgtgagaggtgcatg
aatgggtatcacggtaacccagtgctgggttcaggagaacattgccgaccttgtccatgc
ccaggtaacccaggcagtggacattcaaatgcagattcttgccacatgcaacattcctcc
aagcagatcatctgccactgcaagccaggatacgcaggacatcgctgtgaccgctgtgct
ccaggttactatggccacccagagcaagaagaaggagagtgtcggccatgtgagtgtaac
gggaacattgtggctgaagaccctgaatcatgtgacccccacacaggcgagtgcttgaag
tgcctttacaacacagatggaccttcatgttcggagtgcaagcctggctactatggcaac
gccctggccagggattgtaggttgtgtacatgtatgagattgggaacagaccaggagtac
tgccttgataaggtatgttactgtgacaaacagaccggtgcatgtccctgcaggcctaac
gttgttggcaataactgtgaccagtgtgctgccaaccactggaacctgggcatggatgat
ggctgtgaggcctgtgaatgccatccacagaacagctatagctcacactgcaactcgatc
agcgggcagtgtcactgccggcaaggttttgggggcaagcaatgcaccgagtgtgagccg
ttccactggggtgatccagcagtgtactgtgaggagtgtaagtgtcactggcagggatca
gtgacaggtcgatgtgaccgtatcacaggggcatgtgagtgcaaagagtgggcagcaggc
caacattgtgacaggtgcacccgtggttttatcggacatttccccaagtgtgttccttgc
cacccctgcttccagctttgggacgacattgtatgccaagtcaaacatgacatggacaga
atccgcttcattataaccaagatcctggagatgggcgaggtgcccggagttgccgacacc
cgcatccatgagctggagcggaagctggctgagatccagaagctgctccaggatggagaa
ggagacaggatttatcagctgatcaaccaggccattgacgacttgagggttgagatagct
gtcactgacggccgtttgatgggtgcagagagagaactgaacgtgacgacagagcataac
aacatcttaaaacacaatttgacagcacttgagcgagagttcagggatctgaacaccacc
tttactcagtggcacagagaactggagaactctgttagtggtgaaattacaggtctgcta
aacaaagtgcggaaatactaccaagagtctttggacgctgagcagaggtgcaatgcttct
gtttctggggctcagagtcctgtggagcagtctcaagacaaacgcaacatgaccgaggcc
ctgctggaccagagaaaggacaagtttatgcgcaatgtcacagctcagaagaagtccttg
tctgagctcaaaaagaaagcagaaaacatggatggaaaagtccatcaactgagccaaaag
gtttgtggcagcagtggcaatatgagcgctgatggttcatgtccagacagcccttgtgga
ggtgttgcttgtaaggacagtaatgataaactagtgtgtggagggccacattgcaacggc
actgttggcgagtcaatcagggcgctggagaaagccaatgatctcagcaagaacctgaca
gctgtcagcgaggacctcatgaacatggccaaaaagctccaggacattgctacactcact
gagaatgtgaaggcccaggcgatgaacactctggacaaagctcagaagaagaaagagctg
tttgaaaaatccaataagaaactgaaagatttcatccagacgatcagagactttttaact
gaggaaggagcagatccagagagcatagagaaagtggcacagcaggttttggccatcacg
ctgccggtcaatcggactgaactggacagcatagttctacagataaaagacaccattgcc
aacctcaccgacgtggatggagtcttcaactactctgctgagcagctggccaaagccaag
gacctgcttgatagagccaccaatgaacaggaaaatgcagggaaaattagtgatgttatt
aacaagactaaagaggcaatgaacactactcaggaggccatagagaaggcaatgacggca
atagagaaagccttggaaaacctcaacagcacacagagcgttacttcaatggtggaagac
aaactctcaaatttagaagccaaccttatggatatgatgatgcgtttggctaatttatcc
caagaagtggattttttgaaaaataagacagaacaaaacagacagcaggcacaggaagcc
aaggcggtatcagagaatgccactcaggctgcctctgaactaacagaggatttgtcacat
gttgagagtcgttataaggaactaaaagataagattgattctttgggaggagcggcacca
ggcaatattacccagaaagcagtggacatgaagaacgaggcagaggatcttctcaggaaa
gccaacaaggacatggaaacacttaaaaagctggagcgaaaactgcagaagaatgagcag
agaatgcaacagcagcgggatgagctggcggagctggaaagcaatgttacagacatcaga
aatttcatcagagaaaaagtctctggctataacacctgttag
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