Ictalurus punctatus (channel catfish): 108276238
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Entry
108276238 CDS
T04658
Symbol
eef1a2
Name
(RefSeq) elongation factor 1-alpha 2
KO
K03231
elongation factor 1-alpha
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108276238 (eef1a2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108276238 (eef1a2)
03016 Transfer RNA biogenesis [BR:
ipu03016
]
108276238 (eef1a2)
03012 Translation factors [BR:
ipu03012
]
108276238 (eef1a2)
04131 Membrane trafficking [BR:
ipu04131
]
108276238 (eef1a2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108276238 (eef1a2)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108276238 (eef1a2)
Transfer RNA biogenesis [BR:
ipu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
108276238 (eef1a2)
Translation factors [BR:
ipu03012
]
Eukaryotic type
Elongation factors
108276238 (eef1a2)
Membrane trafficking [BR:
ipu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
108276238 (eef1a2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Proteins found in most exosomes
108276238 (eef1a2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
108276238
NCBI-ProteinID:
XP_017343235
Ensembl:
ENSIPUG00000008686
UniProt:
A0A2D0SLT4
LinkDB
All DBs
Position
15:11654340..11661380
Genome browser
AA seq
463 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVAVNKMDSTEPSYSEKRYDEIVKEVSAYIKK
IGYSPASVPFVPISGWHGDNMLEPSTNMAWFKGWKLERKEQHATGITLLEALDTIMPPTR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHESLS
EAVPGDNVGFNVKNVSVKDIRRGNVCGDSRSDPPQEASGFTAQVIILNHPGQISAGYSPV
LDCHTAHIACKFAELREKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKNVEKKVGGSGKITKSAQKAQKTGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagaagatacatattaatatagttgtgattggccatgttgattctgggaag
tccaccaccactggccacctcatttataagtgtggcggcattgacaagagaaccatcgag
aaatttgagaaggaggctgcagagatggggaaaggttcgtttaaatatgcttgggttctg
gacaagctgaaggcagagcgagagagaggcatcacaatagacatctccctgtggaaattt
gagacctcaaaatactacatcaccatcattgatgctccaggacacagagatttcatcaag
aacatgattacagggacttcccaggcagattgcgctgttcttatagtggcagctggggta
ggtgagtttgaggcgggtatctctaagaatggacagacgcgtgaacatgccctgctggca
tacacactgggtgtcaagcagctgattgttgctgttaacaaaatggattccacagagcct
tcttacagtgagaaacgctatgatgagattgttaaagaggtcagtgcttacatcaagaag
attggctacagccctgcctctgtacccttcgtccccatttctggatggcatggggacaac
atgctggaaccttctactaatatggcatggtttaaaggctggaaacttgagcggaaggaa
cagcatgccactggaatcactctccttgaggccttggacactatcatgcctcctacacgt
cctactgacaagcctttacgccttcctctgcaggatgtttacaaaattggaggcattgga
acagtgcctgtgggcagagtggaaactggcatcctgcgtccaggtatggtggtgaccttt
gcccccgtcaatatcaccacagaagtgaagtctgtggagatgcaccatgagtccctgagt
gaagcggtaccaggtgataatgtgggattcaatgtgaagaatgtgtccgtgaaggacatt
cgcagggggaatgtgtgtggggacagccggtcagatccaccccaggaagcttcaggcttc
acagcacaggttattattctaaatcatccagggcaaatcagtgctggatattcccccgtc
ctcgactgtcacacggctcacatcgcctgcaagtttgccgagctgagggagaagattgac
cgtcgctcagggaagaagctggaagacaacccaaagtttctgaaatctggagatgctgcc
attgtggacatgattccagggaaacccatgtgtgtggagagtttttctcagtaccctcct
ttgggacgctttgctgtgcgagatatgagacagacagttgctgttggggtcatcaagaat
gtagaaaagaaagttggtgggagcggcaaaatcaccaaatcggcccaaaaagctcagaaa
actggcaaatga
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