Ictalurus punctatus (channel catfish): 108276281
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Entry
108276281 CDS
T04658
Name
(RefSeq) transcriptional activator Myb
KO
K09420
transcriptional activator Myb
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108276281
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
108276281
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Cmyb_C
LMSTEN
Myb_DNA-bind_7
Myb_DNA-binding_7
SANT_DAMP1_like
DUF6581
Spore_III_AB
DUF6357
Motif
Other DBs
NCBI-GeneID:
108276281
NCBI-ProteinID:
XP_017343312
Ensembl:
ENSIPUG00000010846
UniProt:
W5U6E9
LinkDB
All DBs
Position
15:22181789..22191731
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AA seq
608 aa
AA seq
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MARRPRHSVYSSDEDDDDVEIYDHDYDAPLAKTGKRHLGKTRWTREEDEKLKRLVEHHGS
EDWKVIASFLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAK
HLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHEKLGNRWAEIAKLLPGRTDNA
IKNHWNSTMRRKVEQEGYLQHTAKVSSSPITSGYTKPSHLLNYSQTPTSSSMPTSPITNQ
YPAQYYIPDPQRVPFPLALQLNIFNIPQHGTAAIQKHYNEEDPEKEKRVKEIEMLLMSTE
NELKGQQALPISMASYTWGRGSLTDTSVGVAVSVPAPPLEQGCLPEESAHGNTNSPNGSG
GGGTNGGGSAAGNSGVLAALPEFMDAIDSFLNASVSPDPDGQSLPVSPSAVCSQKPLQPD
LALHHQKENDMFRTPTLRRSIMECSPRTPTPFKTALTLQDTKYGPLKRAHSPPVDAVVGG
IKQEPQECEVSVGGAHHDQPPLKKIKQEVEPTCLQWEGQNLHAQLFPSSGPAHNMPDLLT
SSLLMLPGSEKSEDGHKAAQMPRRTLGSPVQHVGTWEQVLCGKTEDQLLPSEPTHKYLNN
FCSRTLVM
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcgaccgagacacagtgtttacagcagcgacgaggacgatgacgacgtggag
atttatgatcacgactacgatgcgccgttagccaaaacaggaaaacggcacctcggcaaa
acacgctggacacgtgaagaggatgagaagttgaaaagattggtggaacatcatggctca
gaagactggaaagtcatcgccagctttttgcctaaccgcacggacgtccagtgtcagcac
cgctggcagaaagtcctcaaccccgagctcattaaaggaccctggaccaaagaagaagac
cagcgggtgatcgagctggtgcagaagtacggtccgaaacgctggtcggtcatagcgaag
cacttaaaggggcgtatcggcaagcagtgtcgcgaacgctggcataatcacttaaacccg
gaggtaaagaagacgtcctggacggaggaggaagatcgtatcatctaccaggcgcacgag
aaactcggcaaccgctgggccgagatcgccaaactgctgccgggcagaacggataacgcc
ataaagaaccactggaactctacgatgcggcgtaaagtggaacaggaaggctatctgcag
cacacggctaaagtcagctcatcgccgattaccagcggatacacgaaaccgtcccacctg
ctcaactacagccagactccgactagcagctccatgccaaccagccccatcactaaccag
tacccggcccagtactacatccctgacccacaacgggtgccgtttccattggctctgcag
ctgaacatttttaacatccctcagcacggcactgcagctatacagaaacactataatgaa
gaagatcccgagaaagagaagagagtgaaggagattgagatgcttctgatgtcgacagag
aatgagctgaaaggacaacaagcactacccatctccatggccagttacacatggggtcgg
ggctctttgactgacacctcagtaggcgtggctgtctccgtcccagccccacccttggag
caaggctgccttccagaggagagcgctcacggcaacacgaacagtccgaacggtagcggc
ggcggcggcacaaacggcggcggcagtgcagcaggcaacagcggcgtcctggcagcctta
ccagagttcatggatgccatcgattctttcttaaacgcttccgtgagtccagacccggac
ggtcagagtctacccgtctcgccctcagctgtgtgctcccagaagccgctgcagcccgac
ctcgctctccaccaccagaaggagaacgatatgttcaggactccgactctaaggcgctcg
atcatggagtgttctcctcgcactcctactccattcaaaacagcactgaccttgcaggac
accaaatatggcccgctgaagagggctcacagccctcctgtagatgcagtagttggagga
attaaacaggagcctcaggaatgtgaagtgagcgtcggaggagcgcatcacgaccagcct
ccgctcaagaagattaaacaagaggtcgagccaacgtgtctgcagtgggagggacagaat
cttcatgcccagctttttccttcaagtggccccgcccacaatatgccggatctgttgacg
agctcgctgctgatgctgcccggatcggagaagagcgaggacggacataaagccgctcag
atgccccgcagaactctgggtagcccagtgcagcacgtgggaacatgggagcaggtgctt
tgtgggaagaccgaggaccagcttctgccctctgagccgacacacaaatacctcaacaac
ttctgctcccgcacgctggtcatgtag
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