Ictalurus punctatus (channel catfish): 108276290
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Entry
108276290 CDS
T04658
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108276290 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108276290 (l1cama)
04090 CD molecules [BR:
ipu04090
]
108276290 (l1cama)
04091 Lectins [BR:
ipu04091
]
108276290 (l1cama)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
L1 family
108276290 (l1cama)
CD molecules [BR:
ipu04090
]
Proteins
108276290 (l1cama)
Lectins [BR:
ipu04091
]
I-type lectins (Siglecs)
108276290 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Bravo_FIGEY
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Ig_5
V-set_CD47
Ig_C17orf99
Ig_J
Motif
Other DBs
NCBI-GeneID:
108276290
NCBI-ProteinID:
XP_017343332
Ensembl:
ENSIPUG00000009533
UniProt:
A0A2D0SKU3
LinkDB
All DBs
Position
15:21314955..21371293
Genome browser
AA seq
1280 aa
AA seq
DB search
MPTTLLQQAGSRGRHLNHPLPLLGTLFLLVLAPTPGQTAIRIAEHYRIKDLKTPPQITVQ
PESIIAFSSDDIMLKCEATGDPSPIFRWVKDGMAFDPSSISGVTTFLDSGSFMVKESPIH
QFHGNYTCLASNELGTAVSNEVHIITEDTPTIQREKKEEKRAEEGSPVILHCNPPQSSAT
PLIHWMDRSLRHIKQSDRVIQGRDGNLYFSHVTLGDSRNDYTCNVQFLGARIIVAKEPIS
LKVTTSNSLRNRRPQMMRPTGSHSSYLVLRGQTFELECIVQGLPTPSIQWVRKDGVLPES
RTSSKNSTEKWLLRFTNISEQDDGEYQCTANNSQGTVTHTYTVSVEAAPYWIKEPVSELY
APGEMVRLECRADGIPTPQVTWSINGYPLSDIDPESRRTVKGGTLILEKVKLSDTAVYQC
KASNKHGTILINTYVFVVVLPPQILTEDSLLYRVTEGKTAKLQCMTFGSPRPKVTWERET
WDFVISNSRMNQLSNGTLEISNVSYNDTGLYTCSVGEDKLSITAELEVLNRTVIVNPPQA
LYVQKGKTATFTCQYQMDSNLGPPQILWRRTNKKLDESSDIDKYIIDETELIINDVQDED
EGVYSCEVITSLDMAEASGSLTVVDRPDPPSMLQITELGDHAVTLLWVPGDNHKSPILEY
VVEAEETSTDTEEWEELMRAAGDTRRTRLPLKPFLSYRFRVIAINKIGKSDPSQPSVAFS
TPAARPSSNPEGVRSESLDPDTLVITWKEMDRRSFNGPGFRYKVMWRKVVGSGPSWHSNF
TTSPPFVVMDVGDFSAFDIKVQAVNDLGEGPEPKSTIGYSGEDYPVDAPLNVGVDLLNST
AIGVTWAPVDSETVKGHLMGYKIHLAYYGSCGKHHHQKCISGEGEPLNVVVVTTRANEEK
KVLGGLRPYSSYSLTVSVFNSKGDGPESEARPFHTPEGVPGPPTSLILSSPSETEMTLHW
TPPSQENGILVGYLLQYKELDNADSPMQVEKIGDPTVHQLNIKDLDRHSRYRFYLRGYTA
AGEGLPITKVGATTLDGGPPRNFNLSVGETAVNLSWVFPERQRNVGFHIKYMRKNGHGQW
MKSEKVNTSQSFYSMQGLQPGSRYSLCFIFSNGTFWETDIETKGAGVPEKQSSFATEGWF
IGLISALVLLLLLLLILCFVKRNKGGKYSVKDKEEGQVDSESRPMKDETFGEYRSLESDN
EEKRTASQPSLCDDSKLCSDDGLDDYGNSHSVHTKVTMDESLASQCSGVRDGLEIERHDS
SPLKSAATNHGLPNSAVVLD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccacgctactacagcaggctggcagcagggggcgccacctaaatcaccctctc
ccactcctcggtacccttttccttctggtgctcgctcctacgccaggccagactgccatc
cgtattgcagaacactaccgcattaaagacctaaagacgcccccacagataactgtccaa
cctgaatccatcattgccttctcctctgatgacatcatgctcaagtgtgaggcaactggg
gatccctctcccatatttcgatgggttaaagatggaatggcatttgacccatccagcatc
tctggtgtcaccacatttctcgattctgggagttttatggttaaagaatctcccattcac
cagttccatggcaactacacctgcctggcctccaatgagctgggcacggctgtctccaac
gaggtccacatcataaccgaggatactcctacaatacaacgtgagaagaaggaggagaag
agggcggaagaaggaagtcctgttatcttacactgcaaccctccgcaaagttctgcgact
cctttgattcactggatggataggagtctccggcacatcaagcagagcgatcgtgtgatt
cagggccgtgatggaaacctctacttctctcatgtgacccttggggacagcagaaatgat
tacacttgcaacgtgcagtttctgggagcgcgcatcattgtagccaaagaacccattagc
ctaaaggtcacaacgtctaactcattgcgaaacagacggccgcagatgatgagacctacc
ggctctcacagctcctatctggtcctgaggggccaaaccttcgaactggagtgtatcgtc
cagggcctgcccactccctccatccagtgggtgaggaaggatggagtgctgcctgagtct
cgtacatccagtaagaactccacagagaaatggctgctgcgcttcactaacatctcagag
caggatgatggggagtaccagtgcacagccaacaactcccaaggcaccgtcacacacact
tataccgtctctgtggaagctgctccgtactggataaaggaaccggttagtgaactgtac
gccccaggagagatggtccgattggagtgtcgggcagacgggatcccaactccgcaagtc
acctggagtatcaacggatatcctctctcggatattgacccggagtcgcggcgtactgta
aaaggaggaactctcatactggaaaaggtgaagctgagtgacactgcagtgtaccagtgc
aaagcctctaataaacacggcaccatacttatcaacacctacgtcttcgtcgtcgtgctt
cctccacagatcctgacggaggactcgttgttgtacagagtgaccgagggaaagacggcc
aagttgcagtgcatgaccttcggttcgcctcgcccgaaagtcacatgggagcgtgaaacc
tgggactttgtcatttccaactccaggatgaatcagctaagcaatggtactctggagatt
agcaatgtatcctacaatgatacaggactgtacacctgctcagtgggtgaagacaaactc
agcatcactgccgagctggaagtcctcaaccggacagtgatcgtgaatcctcctcaggcc
ctgtatgttcagaaggggaagacagccaccttcacctgtcagtaccagatggacagcaat
ctgggtccacctcaaatcctgtggaggagaaccaacaagaagcttgatgaatcctctgat
atagacaagtacataattgacgagacagagctcataataaatgatgtccaggatgaagat
gagggtgtttatagttgtgaggtcataacaagtctggacatggctgaagctagtggcagc
ctcacagttgttgatcgaccggaccctccttccatgctgcagatcactgagcttggagat
cacgcagtaactctgttatgggttcctggggataaccacaaaagccctattttagagtat
gtggtggaggctgaagagactagcaccgacacagaggagtgggaggagcttatgcgggca
gctggagacactcggcgcaccaggctcccactgaaacctttcctctcgtaccgcttccgg
gtcattgccatcaacaagattggcaagagtgaccccagccagccttcagtagctttctcc
actcctgcagctcgaccaagcagtaacccagaaggagtgcgcagcgagtccctcgaccca
gatacgcttgtcatcacatggaaggagatggatagaaggagctttaatggcccgggtttc
cgctacaaagtgatgtggaggaaggttgtaggcagtgggccatcttggcactctaacttt
accacctcaccaccctttgttgtcatggatgtgggagatttcagcgcatttgacattaag
gtgcaggctgttaatgatctgggagagggcccagaacctaaatctaccatcggctactct
ggagaggattatcccgtggacgctcctctgaatgtaggagtggatctgctcaacagcact
gccatcggggtaacgtgggccccggtagacagcgagaccgtgaagggacatctgatgggc
tacaagatccacctggcgtactacggttcctgcggcaaacaccatcatcaaaagtgcatc
agtggagaaggcgagccactgaatgtggttgtagtgacaaccagagctaacgaggagaaa
aaggttctgggaggcctgcggccgtattcctcctattctctcactgttagtgtcttcaac
agcaagggagatggacccgagtcagaagcccggcccttccacacgcctgagggagttcct
ggtcctcccacttctttgatattgtccagtccctctgagacggagatgactctccactgg
actccaccttctcaagaaaatggaattctggtcggatacctactacagtacaaagagtta
gacaatgcggacagccccatgcaggtggagaagattggtgaccccacagtgcatcagcta
aacattaaagatctggaccgtcatagccgttaccgtttctacctgcgggggtacactgca
gctggagaaggcctgcccatcaccaaagtgggagcgaccacacttgatggaggtccacct
cgcaactttaatttgtctgtaggagagacggcagttaatctaagctgggtttttcctgag
agacaaaggaatgtcggtttccatatcaaatacatgaggaagaatggccacggacaatgg
atgaagtcagagaaagtgaacacgtctcagtccttttactccatgcagggcctccagcct
ggatctcgttacagcttgtgcttcatcttcagcaatggtaccttctgggaaactgacata
gaaacaaaaggagcaggagtgccggagaagcagagtagctttgctactgaaggctggttt
attgggctcatcagcgccctcgtgctgttgttgctgcttctgctcattctctgctttgtc
aagcggaataaaggtggaaagtattcagtgaaagacaaggaggagggccaggtggactcg
gagtctcggcctatgaaggatgaaacgttcggggagtacagatcactagagagtgacaat
gaggagaagcgcacagccagccagccgtctctgtgcgatgacagcaagctgtgtagcgac
gatggcctggatgattacggcaacagccacagcgttcacaccaaggtgaccatggacgag
tctctggccagtcagtgcagcggagtcagagacgggctggagatcgagaggcatgacagc
tcgccccttaaatctgccgctaccaaccacggcctgcccaactctgctgttgtcctcgac
tag
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