Ictalurus punctatus (channel catfish): 108276295
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Entry
108276295 CDS
T04658
Symbol
syt6a
Name
(RefSeq) synaptotagmin-6
KO
K19906
synaptotagmin-6
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276295 (syt6a)
Membrane trafficking [BR:
ipu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
108276295 (syt6a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PI3K_C2
CEP76-C2
Motif
Other DBs
NCBI-GeneID:
108276295
NCBI-ProteinID:
XP_017343350
Ensembl:
ENSIPUG00000022094
UniProt:
A0A2D0SM48
LinkDB
All DBs
Position
15:4138682..4221191
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AA seq
539 aa
AA seq
DB search
MSAVGKEHDMVCEKAVALITDLCMQESPLLEHKTCEEFLFFITNQDYSLNQPDVTVGIPV
GILVTCSLALLLLVALASWKLCWVPWRNKAVTSSSSVALTTDSYPSLQPLSRVPSPQQPL
VGMAMEKVKESLTPMGFLEAAMKISHTSPDIPAEVQLSMKDHFLRRTQRMQRQTTEPASS
TRHSSFKRHLPRQMQVGSLDLGDDYVDMDEQPTSIGRINPELYKQSMLESEESAKKGGAK
TCGKINFSLRYDYENETLLVHILKAFDLPAKDLCGSSDPYVKVYLLPDRKKFQTRVHRKT
LNPTFDEIFHFPVPYDELQARKLHLSVFDFDRFSRHDMIGEVEVDNLFEVSDLSRETSIW
KDIQYSTTESVDLGEIMFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLICDG
KRLKKKKTTIKKNTLNPTYNEAIIFDIPPENMDQVSLHISVMDYDLVGHNEIIGVNRVGC
GAEGLGRDHWNEMLAYPRKPIAHWHPLLESKKSEKEWKTRTASFDSQGSCPSPKAPASP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgtcgggaaggagcatgacatggtgtgtgagaaggcggtggccctcataact
gacctctgcatgcaagagagcccccttttagagcacaagacctgcgaggagtttctcttc
ttcattaccaaccaggactacagcctcaaccaacccgacgtcactgttggcatccccgtt
ggcatcctagtgacgtgcagtttggcattgctgctactggtggcattagcttcctggaaa
ctgtgctgggtaccttggcgcaacaaggccgtgacgtcctccagttccgtcgcccttacc
acggacagctacccgtcccttcagccgctgtcgcgtgtgcccagtccccagcagcccttg
gttggcatggccatggagaaagttaaggagtcgctgacacccatgggcttcctggaggca
gccatgaagatcagccacacgtcaccggacattccagcagaggtacagctctccatgaag
gaccactttctgcggcgcacacagcgcatgcagagacagaccacagaaccagcctcatct
accaggcacagctccttcaaacgtcacctgccccgtcagatgcaggtgggaagtctggat
ctgggagacgactatgtggacatggacgagcagcccacaagcatcggccgcatcaatcca
gaactctacaagcagagtatgctcgagagcgaagagtctgccaagaaaggtggtgccaag
acctgtggtaagatcaatttctcactgcgctatgactacgaaaacgagaccctgctggtc
cacatcctcaaagcctttgacctgccggctaaagacctctgcggcagttcagacccctat
gtgaaggtctacctgctgcctgaccgtaagaagttccagacacgcgtccaccgcaagaca
ctcaaccctacattcgatgaaatattccatttcccagtgccctacgatgagctgcaagcc
aggaagctccacctcagcgtgttcgactttgaccgcttctcccggcacgacatgatcggt
gaagtcgaagtggacaacctgtttgaggtgtccgatctctcccgggagacttccatctgg
aaggacatccagtactccaccactgagagcgtggaccttggggagatcatgttctcgttg
tgctacctgcctacagctggaagacttacactcactgttatcaagtgcaggaacctcaag
gccatggacatcacaggatattcagatccctacgtcaaagtgtctctcatttgtgatggg
aagcggttgaaaaagaagaagaccacaatcaaaaagaacacactcaaccccacctacaat
gaagccatcattttcgacatccccccagagaacatggaccaagtcagcttgcacatctcc
gtcatggactacgacctggtgggtcataacgagatcattggcgtgaaccgtgtcgggtgc
ggagccgagggcctcggcagggaccactggaatgagatgcttgcatacccacgcaaaccc
attgcacactggcaccccttgctggagtccaagaaatcagaaaaagagtggaaaaccagg
acggctagttttgacagtcagggctcatgcccttcccccaaagcacccgccagcccttga
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