Ictalurus punctatus (channel catfish): 108276315
Help
Entry
108276315 CDS
T04658
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1 isoform X1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108276315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276315
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108276315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
FF_PRPF40A
PH
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
108276315
NCBI-ProteinID:
XP_017343385
Ensembl:
ENSIPUG00000018899
UniProt:
A0A2D0SM81
LinkDB
All DBs
Position
15:complement(26898851..26956654)
Genome browser
AA seq
1165 aa
AA seq
DB search
MIGPGSGFITADFLSIVLWTFFFFFALVMADKIWRKSCEFFSGRSSFFGRRHVESKSDVE
GEVQSSEPSSSLDRGKGYGPLTHSSSVSPDHFEGLGYGQNAQAGPQRPRRPKLQHSQSIL
RKQAEEEAIKRSRSLSESYELSTDLQDKQVEMLERKYGGRFISRHAARTIQTAFRQYQMN
KNFERLRSSMSENRMSRRIVLSNMRMQFSFEGPEKATNSFFDGKQLSLTEEGTPTEPVAK
IECGDMVPLQVAAPSAPNDLSDTITELEDAFSRQVKSLAESIDDALNCRSLHEEEDQEPE
QVQDMQGELSYQVKPTNGSDRRKLDEMMASYSGVTLFIDEEDLCPPTQLSHTVDPPSSTE
SDHHAINSSQEYWPMDTKDEKIDTDTSCRSTPSTDCQEPRLRIDRLPLLTIEPPSDSSLE
MSDRSEIDSVKRQNVYERTTAGPQASPKHITHSLPPRVSSLSRDEDPIRHRHRQLESHLA
INGNRQSKSESDFSDGDNDSINSTSNSTDTINCSSESSRDSMREQTLSKQTYHKETRNSW
DSPAFSNDVIRKRHYRIGLNLFNKKPEKGIQYLTERGFIPDTPVGVAHFLLQRKGLSRQM
IGEFLGNRQKQFNRDVLDCVVDEMDFSGMELDEALRKFQAHIRVQGEAQKVERLIEAFSQ
RYCICNPGVVRQFRNPDTIFILAFAIILLNTDMYSPNVKPERKMKLEDFVKNLRGVDDGE
DIPRDMLIGIYERIHEKELKTNEDHVSQVQKVEKLIVGKKPIGSLHQGLGCVLSLPHRRL
VCYCRLFEVPDPNKLQKLGLHQREIFLFNDLLVVTKIFQKKKNSVTYSLRQSFSLYGMQV
LLFENQYYPNGIRLTSAIPGADVKVLIIFNAPNPQDRKKFTDDLRESIAEVQEMEKYRIE
SELEKQKGVVRPSMSQSMSGLKKEVGNGTMSRASLDDTYAMGEGLKRSALSSSLRDLSDT
GKRGRRTSAGSLDSNMEGSIISSPPQLPRRAPSGREGPPRPRYSGTTPSSSSSLLGSLFG
SRRGKPPPRPPLPAPPSSSSHHPIHPTLISHKPHPTNLHHTAQAQLDPQRSQHCSLPQNP
PPYQHHHHYDPPPVGLWFHRQQHSGHLSAPHHHPQLAHNHLPRHQHHHHHQQRHQHQEQH
LVAAASSSSCPISAKPKHCGISTVV
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgattggtcctgggtctggtttcatcacagcagacttcctcagcattgtactttggact
tttttttttttttttgctctcgtgatggctgataagatttggaggaagagctgcgagttc
ttcagtggtagaagttctttctttggaagacgacatgtggagagtaagagtgatgtggag
ggggaagtccagagcagtgagccatcctcttccctggaccgtggtaaaggttacggcccc
ctgacccacagctcgtccgtcagcccggaccattttgaaggcttagggtacggccaaaac
gcccaggccggtccgcagcgtccacggaggcccaaactccagcactcgcagtccatcctc
cgcaagcaagccgaggaagaggccatcaaacgctcgcgctcgctctccgagagttatgag
ctctctacagatctgcaggacaagcaggtggagatgttagagaggaagtacggcgggcgc
ttcatcagtcgacatgctgctcgcaccattcagacggcattccggcagtaccaaatgaac
aagaactttgagcgtctcagaagttccatgtctgagaatcggatgtcgaggcgcatcgtt
ctgtccaacatgagaatgcagttttcttttgagggacctgaaaaagccacaaactcattt
ttcgatgggaaacagttatctctgacggaggaaggaactccgacggaacctgtagcgaag
atcgaatgtggagatatggttcccctacaagtggctgcaccctcggctccaaatgacctc
agtgacactattacagagcttgaggacgctttctctcggcaggtcaaatcactggctgaa
tccatcgacgatgctctgaattgtcgtagtctccatgaagaagaggaccaggaaccggag
caggttcaggacatgcaaggtgaactgtcctatcaggtaaaaccgactaacggctctgat
cgacgcaagttggatgagatgatggcgtcctacagcggcgtgacgctgttcatcgatgag
gaggatctttgtcctcctactcagctctcgcatacggtggatccaccgtccagcaccgag
tccgatcatcacgccatcaactcatctcaggagtactggcccatggacaccaaagatgaa
aaaatagacacggataccagctgccggagcacgccgtccacagattgtcaggagccacgg
cttcgcattgaccgtctcccgctcctgaccatcgaacctcccagtgacagctcgctcgaa
atgagcgaccgctcggagatcgactcggtcaagaggcagaacgtttatgaacggaccacg
gctggacctcaggccagtcccaaacacatcacgcacagtctacctcctagagtgtcctct
ctgtcccgggatgaggatcccatcaggcaccggcaccggcagctggagagccatctggcc
atcaacgggaaccgacagagcaaatcagaatcggacttttctgacggggacaacgacagc
atcaacagcacttcaaactccaccgacacgatcaactgcagctcggagtcatctcgggac
agcatgagggagcagacgctcagcaaacaaacgtaccacaaagagacacggaacagctgg
gattctccggctttcagcaacgacgtcatccgcaagcggcactaccgcataggcctcaac
ctcttcaacaaaaagccagagaaaggcattcagtacctgactgagagagggttcattccg
gatacacctgtgggcgtggctcacttcctgcttcagaggaaagggctgagccggcagatg
attggcgagttcctggggaaccggcaaaaacaattcaacagggacgtcttagactgcgtg
gtggacgagatggacttctcagggatggagctggacgaagctctcaggaaattccaggcg
cacatccgagttcaaggggaagcgcagaaggtcgaacgcctcatcgaggctttcagccag
aggtactgcatctgcaacccaggagtggtgcgccagttccgaaacccagacactatcttc
atcctggccttcgccatcatcctcctcaacacggacatgtacagccccaatgtgaagcct
gagcgcaagatgaaactggaggattttgtgaagaacctcagaggagtggatgatggtgaa
gacatccctcgggacatgctgattggcatttacgagcgtattcatgagaaggagctgaag
accaacgaagaccacgtctctcaggttcagaaggtggagaagctcatcgtcgggaagaag
ccaatcggatctctccatcagggtctgggatgtgttttatccctcccgcatcggaggttg
gtgtgttattgccggctgtttgaagtaccagaccccaacaagcttcagaaactcggcctt
catcagagggagatcttcctctttaacgatctcttggtggtaactaaaattttccagaag
aagaaaaactcggtgacgtacagcctcaggcagtccttctctctgtacggcatgcaggtc
ctgctcttcgagaaccaatattaccctaatggcatccggctcacgtcggccatcccgggt
gctgacgtcaaggtcctcatcatcttcaacgccccgaaccctcaggaccgcaagaagttc
acagacgacctgcgagagtccatcgctgaggtccaggagatggagaagtaccggatcgag
tccgagctggagaaacagaaaggtgtggtgaggcccagtatgtcccagagcatgtctggt
ctgaagaaagaggttgggaacgggaccatgagccgcgccagcctggatgacacgtatgcc
atgggggaggggctaaagaggagcgcgctcagtagctccctgcgggacctttctgataca
ggcaagcgcgggcgccgcaccagtgcaggatcactagacagcaatatggaaggctccatc
attagcagtccacctcagctgccccggagagcgccgtccggccgcgagggtcctcctcgt
ccacgctactctggcaccaccccttcctcctcctcctcgctgctgggatcgctcttcggc
agcaggcgaggaaaacctcctcctcgtcctccgcttcctgctccgccctcctcctcctcg
caccaccccatccaccccaccctcatctcccacaagccccacccaaccaacctgcaccac
actgcccaggcccaactagatccccaacgttcccagcactgttctctcccgcagaacccc
ccgccgtatcagcaccaccatcactacgatccgcctcccgtcgggctctggttccaccgt
cagcagcactcgggccacctctctgccccgcaccaccaccctcaactcgctcacaaccac
cttcctcgtcatcaacaccaccaccaccatcaacaacggcaccaacatcaggagcagcac
ctcgtggcagcggcgtcatcgtcgtcgtgtcccatcagcgccaaacccaaacactgtggc
atcagcacggtggtgtga
DBGET
integrated database retrieval system
