Ictalurus punctatus (channel catfish): 108276328
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Entry
108276328 CDS
T04658
Name
(RefSeq) F-box/WD repeat-containing protein 12
KO
K10267
F-box and WD-40 domain protein 12/13/14/15/16/17/19
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108276328
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108276328
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
Beta-prop_EML_2
WD40_Prp19
F-box
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40
EIF3I
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Motif
Other DBs
NCBI-GeneID:
108276328
NCBI-ProteinID:
XP_017343401
Ensembl:
ENSIPUG00000016758
UniProt:
A0A2D0SLM2
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All DBs
Position
15:25810401..25817265
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AA seq
474 aa
AA seq
DB search
MEYNEHSLTLDSLISIFSFLSEDDLIRVSCVCKEWHEAAETQWLWREMCLRRWGFCNVAQ
LLSDTKSYTWKRYYLHRSSLELNMKLGRSGGDYSCKSLRGHTGRIVGFSYLMGNSALHDM
WNFTPIVCSASTDGTLKAWDIYKGVNLWSSSAQNPLTRIVTDPEQEVVVTSDSAGTINTW
QGRTGELLSAFSSGSSQCTLMTFSTEGNSFVMVGTVLGSFLALTSPQLSEISRHVVCDSF
SLNILLSSPDKKWILTASKDNSDLSPKVFSSPSVCSPVEDAEVVCVNLPISGCAAAVFFP
SQPARLAIVHKNTPFNQKSLSVFEFSLKKSRYKQEAQAREVESFRLNLNTWHSDMVLQAK
GSNMVLLTDGNDLNIYTVKGELISSFKEHLQPITSVCVDDFRVVTASRDLSLRVLTWKKD
GDKGLTLESQYNLLGGSHSMSRGFTAVACDYASIVASVEAVNGKDALKAYIFNS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggaatataatgaacacagtctaaccctggacagtttaataagcatattttcttttctt
agtgaagatgatttaatcagagtgtcgtgtgtttgtaaggaatggcacgaagctgcagaa
acgcagtggttatggagagaaatgtgtctgcgtcgctggggtttttgtaacgtggcccag
ctgttatcggacacgaagtcgtacacctggaagcgttattatctccatcgctcttcactg
gagctgaacatgaagttggggagatcaggaggagattacagctgtaagagcctgagagga
catacaggtcggattgttggcttctcctacctgatgggaaacagcgctttacacgacatg
tggaacttcacgccgatcgtctgcagcgcctcaactgatggaacgctcaaagcctgggac
atttacaagggtgttaatctgtggtccagctccgctcagaacccgctgacccgtatcgtc
acggacccggagcaggaggtcgtggtcacatcggacagcgccgggacgattaacacgtgg
cagggaagaacgggagagctgctgagcgccttctcctccggctcgtctcagtgcacgtta
atgacgttcagcacggaaggaaactctttcgtcatggtgggaacggttctgggatcgttc
ctcgccctgacgtcaccacagctgtcggaaatatcacgccacgtcgtgtgcgactcgttc
agtctgaatattctcctctcatcacctgataagaagtggattctcaccgcatccaaggac
aactcggatttaagcccaaaggttttcagcagtccgagtgtgtgtagtccggtggaagac
gctgaagttgtgtgtgtgaatttacccatcagtggctgcgcagcggcggtgttttttccc
tctcagccggcgcgactcgccatcgttcacaagaacacgccgttcaaccagaaatccctc
tccgtgttcgagttcagcctgaagaagtccagatacaagcaggaggctcaggctcgggag
gttgaatctttccggctgaatttaaacacttggcactcggacatggttctccaggcgaaa
gggagcaacatggttctgcttactgacggtaacgatctgaatatctacactgtcaaagga
gaactcatctccagctttaaggagcatctgcagcccatcacatctgtgtgtgtggatgat
ttccgggtggtcactgcgtcgcgggatttatctttgagagttctgacgtggaagaaggat
ggagataaaggattaactctggagagtcagtataacctgctaggaggctctcactccatg
tccagaggattcactgcagtggcgtgtgattatgcgagtatcgtcgcctcggtggaagcc
gttaatgggaaggacgccctgaaggcctacatctttaattcttga
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