Ictalurus punctatus (channel catfish): 108276370
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Entry
108276370 CDS
T04658
Name
(RefSeq) leucine-rich repeat-containing G-protein coupled receptor 6
KO
K08399
leucine-rich repeat-containing G protein-coupled receptor 6
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108276370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ipu04030
]
108276370
G protein-coupled receptors [BR:
ipu04030
]
Rhodopsin family
Others
R-spondin
108276370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRR_EndoS
LRR_6
7tm_1
LRR_LRWD1
LRR_Zer-1
LRRNT
LRR_R13L1-DRL21
CSTF_C
Motif
Other DBs
NCBI-GeneID:
108276370
NCBI-ProteinID:
XP_017343470
Ensembl:
ENSIPUG00000014158
UniProt:
A0A2D0SMG2
LinkDB
All DBs
Position
15:complement(23281700..23366929)
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AA seq
914 aa
AA seq
DB search
MLRELLLVCVVGSVGAAVGAGVCPSVCSCQQEGALLITDCSELGLSSIPEDLNPLTSYLD
LSMNNISEIQPNAFHNLPFLTELRLSGNQLRHISGSALHGLTGLKILMLQNNQLERLESE
DPWELPNLLSLRLDANLIADVPTQTFSGMRSLRHLWLDDNALTDIPVSALSDLSTLQAMT
LALNRITHIPDYAFRNLSNLVVLHLHNNLIQTLGENCFEGLRSLETLELNFNTLQEFPVA
IRTLNKLQELGFHNNNIRMIPERAFVGNPLLQTIHFYENPIQFVGRSAFQFLPQLHTLSL
NGATEIREFPDLTGTTSLQVLTLTRAGLTSLPPDLCQQLPNLRVLELSHNAVENLPSFYR
CTSLQEIGLQHNQIRRIELNTFQQLASLRSLDLSWNQIEMIHPDAFTSLHSLLKLDLSDN
RLSRVPLSGLSSLTHLKLRGNTHLSHSFREEQLPNIRVIEMPYAYQCCVFGACNGYRSNA
QWEETTGTEEEELQKKALGLVPIHSDYDPDLEEFQAAIEESKLQTSVQCTPVPGPFKPCD
ALFDSWLVRLGMWIVSLVSLLANILLVLSVFASPSYLSPVKFIIGSIGAANLLTGLCVCV
LALIDALTFGEFASYGARWETGVGCGATGFISVAASESSILFLVLAAVQCSVSVSFGKSP
SHGSVRCAAAVCVTLSLVSASLPLLGVGKFGTTPLCIPSPLPDAPPTTLGFMVALIMMNS
LCFLLITSTYIKLYWDLMKGNFDSVWDCAMIKHVAWLIFTNCLLYCPVAFLTFASLLSLI
PVSEDVIKSVLLLLLPLPACVNPLLYLLFNPHFREDAKLLLNRARLVQDRVLDSFVSVEI
EKSSCDSTQALVPFCSEADATLEGSVPLVPCQLQMTNKENAKKEENVWSKRMDTPRGSSH
ISGVYQSSHPVCHS
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggagctgctgttggtgtgtgtggtgggcagcgtgggtgcagccgtgggcgcg
ggtgtgtgtccctccgtgtgctcgtgtcaacaggaaggagcgctgctgatcactgactgc
tccgaactcggactatcatccatccctgaggatctaaacccccttacctcttacctagat
ctcagcatgaacaacatcagcgaaatccaacccaatgctttccacaacctgccgttcctc
accgaactgcgtctctctgggaatcagctccgacacatcagtggctccgccctccatggc
ctcaccggtctcaaaatcctgatgctgcagaacaaccagctggagagactggagagtgaa
gatccatgggaactgcccaacctgctttcactacgtctggacgctaacctcatcgcagac
gttcccactcagacgttttcaggcatgcggtctctacgccacctgtggttggatgacaac
gcactaactgacatcccagtgagcgcgctcagtgacctttcaaccctgcaggccatgact
ctcgcgctcaaccgcatcacacacatccccgactacgccttcaggaacctgtccaacctc
gttgtgctgcatcttcataacaacctaatccagactctgggagagaactgcttcgagggc
ctgcgcagtctcgagactctcgagctgaacttcaacactcttcaggaatttcccgtggcc
atccggacgctgaacaaactccaggagctgggtttccacaacaataacatcaggatgatt
cccgagagagcttttgtggggaacccgctgctgcagaccattcatttctacgagaatccc
atccagtttgttggaagatctgcgttccaattcttgccacagttacacactctatctttg
aatggcgccactgagatacgggaattccctgacctgacagggaccacaagcctgcaagtg
ctcactctgacccgagcaggtctcaccagtctgccacctgatctctgtcaacagctgccc
aatctcagagtgcttgagttgtctcataatgcagtcgagaatttgccaagtttttaccgc
tgtacttcactgcaagagattggactgcagcacaatcagatcaggcggatcgagctgaac
acctttcagcagctcgcatcccttcgatcgcttgatctgagttggaatcagattgagatg
atccaccctgacgccttcacctctctccactctctgctcaaactcgatctgagcgataac
cggttatcccgagtccccctgtccggcctgagcagtcttactcacctcaaactgagagga
aacacacacctgtctcactccttcagagaggaacagctgcccaacatcagggtaatcgag
atgccctatgcttatcagtgctgcgtgtttggagcgtgcaacggctacagatccaacgct
cagtgggaggaaacgacgggcacagaggaggaggagcttcagaaaaaggctctcggtctc
gttccgattcattctgactatgatcctgatctggaggaattccaggcagccattgaagag
tccaaactccaaactagtgtccagtgcacccctgtcccaggtccgtttaagccgtgtgac
gcgctgttcgacagctggttggtgcgtttggggatgtggatcgtttctctcgtctctctg
ctggccaacattctccttgtgctctccgtctttgcctcgcccagctacctctcgcctgtt
aagttcatcatcggctccatcggcgccgctaacctgctcactgggctctgcgtctgtgtg
ttggcgctaatcgacgctctgacctttggcgagtttgcttcctacggtgcacgctgggaa
acgggcgtcggttgcggagcaacggggttcatctctgtagcagcatcagaatcgtccatc
ctgttcctggtgcttgcggcggttcagtgcagtgtttccgtgtcgtttgggaagtcgccg
tctcatggcagcgtccgatgcgccgcggcggtctgcgtgacgctttcgctggtctctgca
agcctgcctctgctgggggtggggaaatttggaaccacgccgctttgtatcccctcccct
cttccagatgccccgcccaccacattgggcttcatggtagctctgattatgatgaactct
ctctgtttcctgctcatcacgagcacctatattaagctctactgggatctgatgaagggg
aacttcgacagcgtgtgggactgcgccatgatcaaacacgtcgcctggctcattttcacc
aactgcctgctttattgccctgtcgcgttcctcacgttcgcctccctgctctcgctcatc
cctgtcagcgaggacgtgatcaaatccgtccttctgctgctcctcccgctgccggcgtgc
gtcaacccgctgctttacctcctcttcaacccgcatttccgcgaggatgcaaagctcctc
ctgaaccgagctcgcctggtgcaggaccgcgttctcgattccttcgtctctgtggagata
gagaagagctcgtgcgactccacccaggcactcgtgcctttttgctccgaggcagacgca
acgctcgagggctctgtgccactcgtgccgtgccagctgcagatgacgaataaagaaaat
gccaaaaaggaagaaaacgtctggagcaaaaggatggacactccgagaggaagctctcac
atctctggagtttatcagtcttcacatcccgtgtgccactcgtaa
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