Ictalurus punctatus (channel catfish): 108276371
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Entry
108276371 CDS
T04658
Name
(RefSeq) box C/D snoRNA protein 1
KO
K27833
box C/D snoRNA protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ipu03009
]
108276371
Ribosome biogenesis [BR:
ipu03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
108276371
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCD1
zf-HIT
RNA_pol_3_Rpc31
Motif
Other DBs
NCBI-GeneID:
108276371
NCBI-ProteinID:
XP_053542266
Ensembl:
ENSIPUG00000002457
UniProt:
A0A9F7TR61
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All DBs
Position
15:7911766..7933208
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AA seq
411 aa
AA seq
DB search
MWDAAFLQNKLDMDLSEEERRGLKRKISLTSCDVCEAEEAKYRCPNCLKCSCSLPCVKQH
KFRSGCSGVRDRTTFVPLSHFSDLHLLNDYRFLEETGRVAERPNRDALLRTRSRHSFRVM
LLLRNARAAKVNLKILPKSFSRGRENTSMYNKIERKLYWHLKLIFPQSDAEYSTRVPEDR
VLEKILSDYVHPTESDPVKRQNLKTYVLTPLDQLSVFMKSEQRLPNSLNYHELDLKKSLR
ENLAFKTVVEYPELHVVVKGHCEEYRTRIPDKGIISSRPSSSSEARGAPESHPARTEKET
MAESELEEGEIQSEDEEDNNLKKTLNEPPHHLNDDDDDDDDLKNTAGSECHLPRPSSDNI
DEDVEGHLGDLESPAVQNAVRLSSCHDDVTKQKSDSLEADVAPLPPPDGGI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacgcggcgtttttacagaacaaacttgacatggacttgtcagaagaggagcgg
agaggactgaagcggaaaatatcgttgacaagctgtgatgtgtgcgaagccgaggaggcc
aagtaccgctgtcccaactgcctgaagtgctcctgcagtctgccctgtgtgaagcagcac
aagttccgctcagggtgcagtggcgttcgggatcgcaccacctttgtccctctgtctcac
ttcagcgacctccacctgctcaacgactacaggtttctggaggagacgggacgcgtcgct
gagagacccaacagagacgcactgctacgcactcgctcacgccacagcttccgtgtgatg
ctgctgttgaggaacgcgagggcagcgaaggtaaatctgaagatcctgccgaagtccttc
agccgtggcagagagaacacgtccatgtacaacaaaatagagaggaagctgtactggcac
ctgaagctcatcttccctcagagcgatgcggaatactccaccagagttccagaagaccga
gttctcgagaagatcctgagcgactacgtccacccgactgaatcggatccggtcaaacgg
cagaacttgaagacgtacgttctcactcccctcgatcagctcagcgtgtttatgaagtct
gagcagaggctgccaaactctctgaactaccatgagctggacttgaagaaaagtctcaga
gagaacctggcgttcaaaacggtggtggagtaccccgagctccacgtggttgtaaaagga
cattgtgaggaataccgcactcgcatcccagacaaaggcatcatctcatcacgtccgtct
tcctcttcagaagctcggggagctccggagagccacccggcaagaacagaaaaggaaaca
atggcagaatcggagctggaggagggagagatccaaagcgaggatgaggaggataataat
ctaaaaaaaacattgaacgaacctccacatcatctaaatgacgatgatgatgatgatgat
gatctcaaaaatacagcaggctcagagtgtcatcttcctcgtccttcaagcgataatatc
gatgaggatgttgaaggtcatcttggtgaccttgaaagtcctgctgtccagaatgcagtg
cgtctttcttcctgccatgatgatgtcaccaaacagaagagtgattccctggaagcagat
gttgctcctcttcctcctcctgatggtggaatatga
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