Ictalurus punctatus (channel catfish): 108276375
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Entry
108276375 CDS
T04658
Name
(RefSeq) limb region 1 homolog-like protein
KO
K25215
protein LMBR1L
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ipu04121
]
108276375
Ubiquitin system [BR:
ipu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
108276375
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Motif
Other DBs
NCBI-GeneID:
108276375
NCBI-ProteinID:
XP_017343476
Ensembl:
ENSIPUG00000008151
UniProt:
A0A2D0SLV0
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All DBs
Position
15:20623422..20643498
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AA seq
493 aa
AA seq
DB search
METNDDVSLREQLFHDRVREIIICVQLFVCLYILSYLILTHFRKNAEFVTDDVEDATVNK
IVLWLCTFTLSVAVGAVLLLPISILSNEVLLTFPHNYYMQWLNGSLIHGLWNLVFLFSNL
SLVFLMPFAYFFTESEGFVGSKKGVMARVYETTVMLLLLSLLVLGIVWVASALLHDNMAR
ENLYDLWEYYLPYLYSCISLFGVLLLLLCTPFGMSRMFSITGSLLVKPRLLEDVEETMNC
AVFEEASLSRKLNNNSTSCWLILNIEAMKRQFVSIQAKRMALETRRKASAWQRNLGYPLV
MLLLLALTVVCVLMVCFHVLELLFDESAMPRGMEDPHLGLASFSMFGSLGATMQVVLILY
LMVSSVVGFYSSPLFSSLLPRAEDTNLTQIIGNCVSLLVLSSALPVFSRTLGITRFDLLG
DFGRYNWLGNFHIVFLYNMLFAGLTSACLINTVTWAVQRELIRAFGLHRLPFTVSRSAVH
VRLLLTSGLSKIQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaacgacgacgtgtcacttagagagcagctcttccacgaccgggtccgagag
atcatcatttgcgtgcagctctttgtctgcctatacatcttgtcctacctcattctgaca
catttcaggaagaatgccgagtttgttacggatgatgttgaggatgccactgtgaataaa
attgtgctgtggttgtgcacgttcactctctctgtagccgtgggtgcagttctcctcctg
cccatttccatcctgtccaacgaagtcctgctgacttttccgcacaactactacatgcag
tggctcaacgggtcgcttatccatggtctctggaacttggtctttctcttttccaacctc
tccttggtcttcctcatgccctttgcttacttctttacagagtcggaaggctttgttggt
tccaaaaagggtgtcatggcccgggtgtacgagactactgtgatgctgcttctgctcagt
ctgctggtgcttggcattgtgtgggtggcatcagcgctcctccatgataacatggccagg
gaaaatctctacgacctgtgggagtattacctgccctacctctattcttgcatctcactg
ttcggagtgctgctgctattattgtgcactccctttggaatgtcacggatgttcagcatc
actggaagtttattggttaaaccacggctgttggaggatgtggaggagacgatgaactgt
gctgtgtttgaagaggcttctctatccaggaaactcaacaataacagcacctcctgctgg
ctgatcctgaatatagaggcaatgaaaaggcagtttgtgagcatacaggccaagcgcatg
gctctggagactcggaggaaggcgtctgcgtggcagcgtaacctgggctacccactggtc
atgctgctgctcctagctttaactgtggtgtgtgtgctgatggtgtgttttcacgtgctg
gaactgctttttgatgagtccgccatgcccaggggaatggaggatccacacctgggtttg
gcttccttctctatgtttggctctctgggggccactatgcaagttgttcttatcctctat
ctgatggtgtcttcagtggtgggtttctacagctctcctctcttcagcagccttctgcct
cgagctgaagacacgaacctcacacagatcatagggaactgtgtgtctctcctggtgctc
agttcggctctgcctgtgttctcccgtactctgggaatcacaaggtttgatctgcttggg
gactttggacggtacaactggctgggaaacttccacatagtcttcctgtataatatgctt
ttcgctggtctcacctccgcctgtttaatcaacacggtcacgtgggccgtgcagagggaa
ctcatccgtgcctttggtctccatcgcctgccttttaccgtgtcccgatcggcagtccat
gtcaggctcctgttgacaagtggactctcaaaaatccagtga
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