Ictalurus punctatus (channel catfish): 108276427
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Entry
108276427 CDS
T04658
Name
(RefSeq) NSFL1 cofactor p47
KO
K14012
UBX domain-containing protein 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108276427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276427
Membrane trafficking [BR:
ipu04131
]
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SNARE associated proteins
Others
108276427
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Paralog
GFIT
Motif
Pfam:
SEP
UBX
UBA_4
UBA_8
UBA_OTUD7A_B
Spt20_SEP
TAP_C
Motif
Other DBs
NCBI-GeneID:
108276427
NCBI-ProteinID:
XP_053542402
Ensembl:
ENSIPUG00000013545
UniProt:
A0A9F7TQQ8
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Position
15:complement(14830671..14840311)
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AA seq
371 aa
AA seq
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MASQDESVRDFVAVTGVEEERARFFLESAGWDLQLALASFFEDGGDDDIVTISQPESGPG
PRSTGPSEHRVTSFRDLTHGDEEESDEEGQRFFAGGSERSGQQIVGPPKKKSTNEVVEDL
FKGAKEHGAIPVDKAGKGLGESSKAKAFVGGGYRLGAAPEETSAYVAGDRRSASSTQDVH
VVLKLWKSGFSLDDGELRNYSDPANALFLESIRRGEIPLELRQRARGGQVNLDMEDHRDE
DFTKSKPAFRAFTGEGQKLGSATPDLVSVPRMDQVLQAAIEAQACAHISVDESQPVTSIQ
IRLADGGRLVQKFNHTHRVSDIRQFVASARPAMAAAEFVLMTTFPNKELTDESQTLKEAN
LLNAVIVQRLK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcaagatgaatcggtgagggattttgttgcagttaccggtgttgaagaggag
agagcccgttttttcctcgaatcagctggctgggatttgcagcttgccctggccagtttc
tttgaggatggaggagatgatgatattgttaccatttctcaaccagaaagtggcccgggc
cctagatccacaggcccaagtgaacaccgggtgacttccttcagagacttgacacatgga
gatgaagaagagagcgatgaagaaggtcagagattctttgctggtggttcagaacgcagt
ggtcagcagattgttggtccacccaagaagaagagcacaaatgaggtggttgaggacctg
ttcaagggtgctaaggagcacggggccattccagtcgacaaagcaggcaaagggcttgga
gagtctagcaaggctaaggcgtttgtaggaggtggttatcgtctgggtgcagccccagaa
gaaacgtctgcctacgtggctggagacaggagatccgctagcagtactcaagatgtacat
gtggtgctgaagctgtggaagtcaggattcagccttgatgatggagagctcagaaattac
agtgatcctgcgaatgccctcttcctggagtccatccgcaggggggagattcctctggag
ctgaggcagcgtgctcgtggtgggcaagtgaatctggatatggaggaccatagggacgaa
gacttcaccaaatccaagcctgcctttagggcttttactggggagggacagaaactgggc
agtgccactccagacttggtatctgttccaagaatggatcaggtacttcaggctgcgatc
gaggctcaggcctgtgcgcatatcagcgtggacgagtcgcagcccgtcaccagcatccag
attagactggccgatggaggacgactggtgcagaagtttaaccacacccacagggtctct
gatatacgccagtttgtggcaagcgctcggccagccatggctgcagcggagtttgtcctc
atgacaactttccccaacaaggagctgacagacgagagtcagacactgaaggaggccaac
ctgttgaacgcggtcattgtgcagcgactaaagtga
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