Ictalurus punctatus (channel catfish): 108276480
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Entry
108276480 CDS
T04658
Symbol
nfascb
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108276480 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ipu04515
]
108276480 (nfascb)
Cell adhesion molecules [BR:
ipu04515
]
Immunoglobulin superfamily
L1 family
108276480 (nfascb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Syndecan
Herpes_gE_N
DUF3792
Motif
Other DBs
NCBI-GeneID:
108276480
NCBI-ProteinID:
XP_017343673
Ensembl:
ENSIPUG00000012067
UniProt:
A0A2D0SN23
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All DBs
Position
15:14312382..14333433
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AA seq
1155 aa
AA seq
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MMTEKLWELLATFILLLQIWKQISAMEIPPDVRQPPMIIKQSVQDHIVEPTDPIIVECEA
TGNPPPVFTWTRNGVYLNVARDPQVTMKRRSGTLEIFFWGRPEDYEGVYQCTATNEFGSA
LSSHIHLRVSKARTWLKEYLEPVSVFVGLPLILPCNPPVGPPKPQTYWMNSSMVPIRQDR
RVSMAGNGDLYFSSVIADDALTNYVCTARFPNSNIIQQKPPLILQVHTARMAAQIAPKFL
KPKGTASTQIAMLGEELTLECFASGVPAPTIKWTKYWESLSMEGMKLENFNKTLRIKKIS
MFDGGDYICTATNRMGSVDHIITVKVKSTPFWVEKPQSLILSRDDGGQIVCHADGIPKPQ
IRWLVNGEPIEDAPKSPSRQVSGDTLIFRAVVPDSTAVFQCNASNDYGYILANAFLAVMD
MKPRLLGIRDDLIKVIEGTRTLLHCPYFGSPKPDLRWSKGGMGLLEGSRYSILSNGTLEI
KHTKLQDQGTYLCVASNVIGRDEMETQLEVKEPIKIIHAPHNVIVVKGSLAQFDCKIQSD
PTLEVKVTWLKDNKFLIFGRRMTKNEDSMSIVDVYRRDEGIYTCRVKTEVEEISASAKLT
VMDRPDPPTDLEVSDPSERSARLTWVPGLSNHSPIKEYLVQYTEDLLADYWLVASGWKNL
TSYPGHLNSVVLQLMPFVEYQFRVVAINEIGSSKPSKPSEYYETGGAVPDAIPRNIKGVG
TGVFINNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSYIVYETDTFT
PYEIKVQAVNYFGLGPESPVIIGYSGEDRPTAAPTDLHVSDVESTKLTVHWQPVSQDSIM
GEIKEYTVYYWRESSRLPHHSVTTRIKSKSFKANGPRLTGTLTGLIPYSNYKMYIVVANN
RYEGPPSDRIEFQTLEGVPSVPRAFRIMHKHYDTIYLDWEEPAEPNGILTGYILKYQTLN
VSAGERMLVEEIPPNTTQFSLRRFDRYTRYKFSLAAQTQVGVGETFTEESPHFTTEEYSR
EQVDIVTQGWFIGLMCAIALFVLIMLTVFFIKKTRGGKYPVRDKRNFALDSMDEKDEGSF
EYRSLERITRAPTLPYSRREEESRQGRSQGHMQKKTNSDDSLMEYTEGDEIEFNEDGSFI
GEYTGTSKRDRDTFA
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgatgactgaaaaactgtgggagctcctagccacattcatactcctgttacagatatgg
aaacagatatctgcaatggaaatcccacctgatgtgagacagcctcctatgataattaaa
cagagtgttcaagatcatatagtggagccaacggaccccatcatagtggagtgtgaggcc
actggaaaccctcctccagtcttcacttggacccgcaatggagtgtacctgaatgttgca
cgtgaccctcaggtcaccatgaagaggcgctctggcacactggagatatttttttgggga
cgtccagaagattatgagggcgtgtaccaatgtactgctactaatgaatttggttcagct
ctatccagtcacattcatttgcgtgtctccaaggctcgtacatggctgaaggaatatttg
gagccagtgtctgtgtttgtgggtctacctttgattctgccatgtaatcctccagtgggt
ccacctaaacctcagacctactggatgaacagctccatggtaccaattcgtcaggatcgt
agagtatcgatggcagggaatggagacttgtacttctccagtgtcatagctgatgatgcg
ctaacaaactatgtgtgcacagctcgcttccccaactccaacatcatccagcagaaacct
ccactaattcttcaggtgcacacagcccgtatggcagctcagattgctcccaaattcttg
aaacccaaaggaacagccagcactcagatcgcaatgctaggggaggagcttaccttggag
tgtttcgcttctggagttccagctcccaccatcaaatggactaaatattgggaaagcttg
tccatggaaggcatgaagctggaaaacttcaataaaacgctgcgaattaagaaaatctct
atgtttgatggaggcgactacatttgtactgccaccaacaggatgggaagcgtggatcac
ataatcacagttaaagttaaatcaaccccattttgggtcgagaaaccacagagtcttatt
ctctctcgagatgatggtgggcagatagtgtgtcatgctgatgggattcccaaaccccag
atacggtggctagttaatggagaacctattgaggatgctcctaagagtccaagcagacaa
gtatcaggcgatactttgatatttcgtgccgtggtgcctgatagcacagctgtgttccag
tgtaatgcctccaatgattatggctacatcctggccaatgccttccttgcagtaatggat
atgaagccacgattgctgggtattagagatgacctaattaaagtaattgaagggactcgg
acacttctgcactgcccatattttggatcaccaaaacctgacctgcgctggtctaaaggt
ggaatgggtttattagagggaagtcgatatagcattctttctaatggaacactggaaata
aagcacaccaaactccaggaccaggggacatatctctgcgttgctagcaatgtcattgga
cgagacgagatggagacacaactggaggtcaaagaacccattaaaatcatccatgcccca
cataatgtcattgtggtaaaagggagcttggcacaatttgactgcaagatccagtctgac
ccaaccttggaggtaaaggtcacctggctcaaggacaacaaattcctgatctttggaaga
agaatgactaagaatgaggactctatgagcattgttgatgtgtatagaagagatgagggt
atttatacctgcagagttaagactgaagtggaggaaatcagtgcatcagccaaactcact
gtgatggatcgtcctgacccacctactgacttggaggtgtcagatccctcagaacgaagt
gctagactcacctgggtgccaggactgagcaaccacagccctataaaagagtatctggtg
cagtacacagaagatctgctcgctgattattggctagtggcaagcggctggaagaacctg
accagttaccctggccacctgaactctgtcgtgttgcagctgatgccatttgttgagtac
cagttccgggttgtggctatcaatgagatcggctccagcaaacccagcaagccatctgag
tattacgagactggtggagctgtgccagatgccatcccaagaaacatcaaaggcgtgggg
actggagtgttcataaataacatggagatcagctgggagccattggagtatagagagtgg
aacgggccaaagctcggctacatggtgtggtggagaagaagagactccagagaggagtgg
aaaaattacaccacctactggtggtgcagttacatcgtctacgagacggacaccttcaca
ccctatgagattaaagtgcaggctgtcaattactttggcctcggaccagaatcccctgtg
atcattggatactcaggagaggatcgtcccacagctgctccaactgacctgcatgtctca
gatgtcgagagcacgaagctgacagttcactggcagcctgtttcccaagacagcatcatg
ggagagattaaagagtacacggtgtattactggcgagagagcagccgcctgccccatcac
agtgtcacaacaaggatcaaatccaagagctttaaagcaaatgggcctcggcttactggc
accctaacaggcctcatcccttacagcaactacaagatgtacatagtagtggccaataac
cgctatgagggtccaccaagcgacaggattgagtttcaaacccttgagggagtgccatca
gttcccagagccttcaggatcatgcataagcattatgacaccatctacctggactgggag
gaacctgcagaacccaatggcatcctgactgggtacatcctcaaatatcagacattgaat
gtgtcagcaggagagcggatgctagtggaggaaatcccccccaacaccacacaattctcg
ttgcgccgctttgaccgctacactcgctacaagttcagtcttgctgctcagacacaggtg
ggagtgggagagaccttcacagaggagtcaccccatttcacaacagaggaatattcccgg
gaacaagtggacatagtcacacagggatggttcatcgggttgatgtgtgccattgcactt
tttgttctcatcatgctcacagtcttcttcattaaaaaaacccgtggagggaagtaccca
gtgagagacaagcggaattttgcacttgactctatggacgagaaggatgaagggtctttc
gaatacaggtctcttgaaaggataacacgtgcacccaccctaccctactccaggcgagag
gaggaaagccgccagggtcggagtcagggacacatgcagaagaagacaaacagtgatgac
agcctgatggaatacactgaaggcgatgagattgagttcaatgaagatggctctttcatt
ggagaatataccggcaccagtaagagagacagagacacttttgcataa
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