Ictalurus punctatus (channel catfish): 108276491
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Entry
108276491 CDS
T04658
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X2
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04010
MAPK signaling pathway
ipu04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108276491
04020 Calcium signaling pathway
108276491
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108276491
Ion channels [BR:
ipu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108276491
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
GRP
Merozoite_SPAM
Myc_N
ETRAMP
Motif
Other DBs
NCBI-GeneID:
108276491
NCBI-ProteinID:
XP_047006813
UniProt:
A0A979EMH0
LinkDB
All DBs
Position
2:complement(20609448..20693830)
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AA seq
2073 aa
AA seq
DB search
MVILLNCVTLGMYQPCENIDCTSDRCQILQAFDAFIYIFFALEMVVKMVALGIFGRRCYL
GDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTL
PMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPEDNFTLPSGVTLPTPYYQPQEDDER
PFICSLAPDNGIMSCSDIPPLREGGTECCLDKEDALQALGSELLSNASSMGLCVNWNQYY
TRCVTGNSNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLII
IGSFFMINLCLVVIATQFSETKQREHQLMQEQRARCLSSSTLASLTEPGDCYEELFQLVC
HVLRKARRRSVALYYTLRGKVPPPGGGRSRRRGGVKANGGKKRQCRSAQVSRCPHHSKME
HSPQPLDNSIPLSVPPNPEDCPECTALSIREGTGPGADTANGEEGEEALEETDREENHLE
ERIEEDEEEEEEEEDDEEVDGQKKKKKKKKKKRRSCFRKAKDLWDEMRVKLWSIVESKYF
NRGIMIAILINTISMGIEHHNQPDELTNVLEVCNIVFTSMFTLEMILKLTAFGFFEYLRN
PYNIFDGIIVIISVCEIIGQSDGGLSVLRTFRLLRVIKLVRFMPALRRQLVVLMKTMDNV
ATFCMLLMLFIFIFSILGMHIFGCKFSLKTEAGDTVPDRKNFDSLLWAIVTVFQILTQED
WNMVLYNGMASTSPLAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSYSDDDRSS
CNFDEKEREKDPLQLSDPKICTLTPNGHLDLAPMPNAIGVYPAERLSFALGSRKSSVSSL
GRTGLEQRTLCPGGGGSLYSWTRPVPQGSWSRRSSWNSMGRLSRSVGVGTGGSLRVRGPH
SYQAEHESLLSPPLHPHPPPPLFSRHFVPCRDRRALSLELPELLQVPGAPPTSLHSHQRK
KSFSGGPAGTAEHQDCNGKTPAVQQQILSEVYPQVNTRKDRDDLEDEIDYSLCFRIQKMI
EVYRPDWCETREDWSVFLFSPQNKFRLMCQSIIAHKLFDYVVLAFIFSNCITVALERPKI
LQGSLERLFLTISNYIFTAIFVGEMTLKVVSMGLYLGDQAYLRSSWNVLDGFLVFVSLID
IVVSMAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLKPIGNIVLICCAF
FIIFGILGVQLFKGKFFYCLGLDVRNITNKSDCLLANYKWVHHKYNFDNLGQALMSLFVL
ASKDGWVNIMYHGLDAVSVDQQPITNNNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHK
CRQHQEVEEAKRREEKRLRRMEKKRRKAHKLPYYASYSHVRLMIHNLCTNHYLDLFITFI
ICVNVVTMSLEHYSQPHSLEITLKYCNYFFTSTFVLEAVLKLIAFGFRRFFKDRWNQLDL
AIVLLSVMGITLEEIEISAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQAL
PQVGNLGLLFMLLFFIYAALGVELFGELVCNEDYPCEGMSRHATFENFGMAFLTLFQVST
GDNWNGIMKDTLRECPSGEYSCNPSLQFISPLYFVSFVLTAQFVLINVVVAVLMKHLDDS
NKEAQEEAEMDAEIEMELAHGALCCMGGLAGAGGGAVGGAGAGGGGKRGGEGEKQGGGGS
GGSSGAAPHSPGEHKTNSSNKLYSPVQENIWLDSVSLLIKDTFDGEVLLIDKLSGSVFHH
YSSPSSCKDCKSHPEEQIHMAELERASLRSEHISDISSSPVRPDDLVLDDQNVLQMEKST
EEVAGGEEAARAEDGGHRWLGKPYTSNRHSIGGTLCSSSNRNDGGTGGDSSTVFHLPAEF
FHPAAAALPAPPRVRLGHKPRGLRLTSPASWASLRSPGANLELLTAQYASHSDSSLATGS
SEGSLQTTMEEGLSFSVSSSQEPNRGLSTETLRPAFDLHANRGVQSNCQGSIDPLHGSDK
AGNSEQLSETLSSLSLTSLLSPSSLVPKLVKKSNSTGSLARGKEGKEGKGVKEGSEGVQL
VNLRVTAKEPGEASEFQGESTSQVRVAGLRKNR
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcctgctgaactgtgtgactctgggaatgtaccaaccgtgtgagaacatcgac
tgcacctctgaccgctgccaaatcctacaggcgttcgatgcatttatttacatcttcttt
gcgctggagatggtggtgaagatggtggctctggggatcttcggccgtcgctgttacctt
ggcgatacatggaacaggctggactttttcatcgtcatggcagggatggtagaatactct
ctcgatctccagaacatcaacctctccgccatcaggacagtgcgagtactcagaccactc
aaagccatcaacagagttcccagcatgcggatcctggtgaaccttctactggacactctg
cccatgcttgggaatgtgctgcttctctgcttctttgtcttctttatcttcggcatcatt
ggtgtgcagctgtgggcggggcttctgcgcaaccgctgctaccccgaggacaacttcaca
cttccgtccggagtgacactccccactccctactaccaacctcaggaggacgacgagcgg
cccttcatctgctcgttagcaccggataatgggatcatgtcctgctcggacattcctccg
ctcagggagggagggacagagtgctgtttggataaagaagacgctctccaggcccttgga
tcagaactgctttccaatgccagctccatggggctctgtgtcaactggaaccagtattat
acccgctgtgtgactggaaacagcaacccccacaagggcgccattaatttcgacaacatt
ggctacgcttggattgtcatctttcaggtgatcacattagaaggctgggtggagatcatg
tactatgtgatggatgctcactcattctacaacttcatctacttcatcctgctcatcatc
attggctcgttcttcatgattaacctgtgcctagtggtcatcgctacacagttctcggag
acgaagcagcgagaacatcagctgatgcaggagcagcgagctcgctgtctgtcctccagc
acactggcatctcttaccgagccgggcgactgctacgaggaactcttccagctggtgtgt
cacgtccttcgcaaggctcggcgccgctccgtcgccctctactacacgctccggggtaaa
gttccgcctcctgggggagggcggagccggagaagaggaggggtcaaagctaacggaggc
aagaagaggcagtgtcgctctgctcaggtgtctcgctgtcctcaccacagtaaaatggag
cacagcccacagcctctagataattctatccctctttcggttcctcctaaccctgaagat
tgtcctgagtgcaccgccctgtcaatcagggaggggacagggccaggggcagacacagcc
aatggcgaggaaggagaagaagcattggaggagacagaccgggaggagaaccacttagaa
gagagaatagaggaggacgaggaggaggaggaagaggaagaggatgatgaagaagtggat
ggtcagaagaagaaaaagaagaagaaaaagaagaagaggaggtcctgctttaggaaagct
aaggacttatgggatgaaatgagagtgaaattgtggagcatcgtggaaagcaaatatttc
aaccgtggaatcatgattgctatcctcatcaacaccatcagcatgggcatcgaacatcac
aaccagcctgatgaactcaccaatgtgctggaggtctgcaacatcgtattcaccagtatg
ttcacattggaaatgatcctcaaactcacggcatttggtttctttgagtacctgaggaac
ccgtacaacatctttgatggcatcatcgtcatcatcagtgtgtgtgagatcatcggtcag
tctgacggcggtctctcagtgttgaggacgttcaggttgttgagggtgataaagctggtg
cgcttcatgccggctctgcgcaggcagctcgtcgtcctcatgaagaccatggacaacgtg
gccaccttctgcatgctcctcatgctcttcatcttcatcttcagtattttgggaatgcac
atattcggctgtaagttcagtctgaagacggaagctggagatacggttcctgatcggaaa
aacttcgactctctgctttgggccatcgttactgtgtttcagatcctgactcaggaggac
tggaacatggttctgtataacggcatggcctccacgtctcctctcgctgctctttacttc
gtggcgttgatgacgttcgggaactacgtcctgttcaacctactggtggccatcctggta
gaggggtttcaggcagagggcgatgctaacaggtcatactcggacgatgatcgatcctcc
tgcaactttgacgaaaaggaaagagagaaagatcctctccagctatccgatcctaaaatc
tgcactctgacccctaacggacatctggacctggcaccgatgcccaacgccatcggagtt
taccccgctgagcgactaagcttcgctctgggctccagaaagagcagcgtgagttccctc
gggagaaccggtctggagcagaggactctgtgtccaggaggaggaggttctctgtacagt
tggactcgtccggttcctcagggctcgtggagccgcaggtcgagctggaacagtatgggg
cggctgagtcggagcgtgggggtgggcacagggggcagtctgagggtgcgaggccctcat
tcataccaagctgagcatgaatccctcctttctcctcctctacaccctcatcctcctcca
ccgctcttctccagacatttcgtcccctgtagggatcgtcgcgctctctctctggagctg
cccgagcttctacaggtccccggtgcgccgcccacatcgctgcactcacaccagcgcaag
aaaagcttctcaggaggaccagcgggcacggcggagcatcaggactgcaacggcaagacg
ccggcagttcagcagcagatcctcagtgaagtttatccacaagtcaacactcgcaaagac
cgagatgacctggaggacgagatcgattacagtttgtgcttcaggatccagaagatgatt
gaagtttatcgtcctgactggtgtgagacgagagaggactggagtgttttcctcttctcc
cctcagaacaagttcagattgatgtgccagtccatcatagcccataagctgtttgactac
gtggtattggccttcatcttctccaattgcatcactgtggctctggagagacccaaaatc
ctccagggcagtttggagaggctttttctcaccatctctaattacatcttcactgctatc
ttcgtgggtgagatgactctaaaggtggtttcaatgggattatacctgggtgatcaggcg
tacctgcgcagcagttggaatgtccttgacggttttttggttttcgtctcgttgattgac
attgtggtgtcgatggcaggcggagctaagatcctgggggttctaagggttctcaggctt
ctgcgcacactgcgccctctcagggtgatcagtcgagctcctggcctcaagctcgtagtg
gagactctgattacgtctctgaagcccatcgggaacattgttctcatctgctgtgctttt
ttcatcatctttggtatccttggagtccagcttttcaaaggaaaattcttctactgcctg
ggtctggatgtcagaaacatcaccaacaagtctgactgcctgcttgccaattacaagtgg
gttcatcacaagtacaacttcgacaatctgggacaggccctcatgtccctatttgtcctc
gcatccaaggacggttgggtcaacatcatgtatcacggtctggatgcagtcagtgtggac
cagcagccgatcaccaacaacaatccatggatgctgctgtacttcatctccttcctcctc
atcgtcagtttcttcgtgctcaacatgtttgtgggtgtggtggtggagaacttccacaag
tgccgacagcaccaggaggtggaggaggccaaaagaagggaggagaagcgactccggcgc
atggagaagaagagacggaaagcccacaagctgccgtattacgccagttacagtcacgtc
cgcctgatgatccacaacctgtgcaccaatcactacctggacctcttcattaccttcatc
atctgtgtgaatgtggtgaccatgtctctggagcactacagtcagcctcattctctggag
atcactctcaagtactgtaattatttcttcaccagcacctttgtgctcgaggccgtgctg
aaactcatcgcatttggcttccgacgcttcttcaaagacaggtggaatcagttggatctg
gctatagttctgctctcagtgatgggcatcacactggaggagattgagatcagtgccgcc
ttacccatcaaccccaccatcatccgcatcatgagggttctgcgcatcgctcgtgtgctg
aagctgttaaagatggcgacggggatgagagctctgctggacacagtggtacaggctcta
cctcaggtgggaaacctcggcctcctctttatgctgctcttcttcatctacgctgcatta
ggagtggaactgtttggagaacttgtgtgtaatgaggattatccgtgtgaggggatgagt
cgacacgccaccttcgagaacttcggcatggcattcctcacactctttcaagtgtccacg
ggtgataactggaacggcatcatgaaggacacgctgcgtgagtgcccctcaggcgagtat
agctgtaacccgagcctgcagttcatctctccactctactttgtgagcttcgtgttgacg
gcgcagttcgtcctcatcaatgtggtggtggctgtgttaatgaagcacctcgacgactcc
aacaaggaggcacaagaggaggccgagatggacgctgagattgaaatggagctagcacat
ggtgccctctgctgcatgggaggtctggctggagctggaggaggagctgttggtggagct
ggagctggaggaggagggaagagaggcggtgaaggagagaagcagggaggtggagggagt
ggaggaagctctggagctgcaccacattcaccaggagaacataaaactaacagctccaac
aaactgtactcacctgtacaggagaacatatggctggacagcgtgtctctgcttattaaa
gacacatttgatggagaggtgttattgattgacaagctctcgggctccgtcttccatcac
tactcgtctccatcatcatgtaaagactgcaagagtcacccggaggagcagatccacatg
gctgagctggagcgagcatctctgagatcagagcatatctcagacatatcttcctcacca
gtgcgccctgatgaccttgtcctggatgatcagaatgttttacagatggagaaaagcacg
gaagaggtagcagggggtgaagaagcagcaagagcagaggacggaggtcacagatggctc
gggaagccatacacatcaaaccgccatagcatcggtgggactctgtgcagcagcagtaat
agaaatgatggtggtactggaggtgattcctccactgtcttccatcttcctgctgagttt
ttccatccagcagcagcagcactaccggcacccccgagggttcgcctgggtcacaaaccc
cgaggcctgaggctgacctctccagcatcctgggcctcccttcgctcacctggggccaac
cttgaacttctcactgcacagtatgcatctcacagtgactcatccctggccacaggcagc
tcagagggaagtctgcagaccacgatggaggaaggccttagcttcagtgtctcttcatca
caggaacccaacagaggactttccacagagacactgagaccagcctttgacctccatgct
aatagaggggttcagagcaactgccagggttccatagaccccttacatggctccgacaag
gctggcaacagcgaacagttatcagaaacactgagcagcctttctttaacatcactgctc
tcgccgagctctctggtgcccaaactggtcaagaagagcaacagcactggaagtttggcc
aggggtaaagagggaaaggaaggcaaaggggtaaaagaaggatcagagggagtgcaactg
gttaatcttcgggttactgcaaaggaaccgggggaagcatcggaatttcaaggggaaagc
acgagtcaagtaagagtggcaggcttgaggaaaaacagatga
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integrated database retrieval system
