Ictalurus punctatus (channel catfish): 108276562
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Entry
108276562 CDS
T04658
Symbol
grik1a
Name
(RefSeq) glutamate receptor ionotropic, kainate 1
KO
K05201
glutamate receptor, ionotropic kainate 1
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04080
Neuroactive ligand-receptor interaction
ipu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108276562 (grik1a)
04082 Neuroactive ligand signaling
108276562 (grik1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ipu04040
]
108276562 (grik1a)
Ion channels [BR:
ipu04040
]
Ligand-gated channels
Glutamate (ionotropic)
108276562 (grik1a)
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
MCH
Motif
Other DBs
NCBI-GeneID:
108276562
NCBI-ProteinID:
XP_047016812
Ensembl:
ENSIPUG00000011621
UniProt:
A0A979F9J7
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Position
16:11665351..11726396
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AA seq
896 aa
AA seq
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MKYIISFDHGAMEKRARLLLSLLFLMSKLCLSEHQVLRIGGIFETRENEPVSVDELAFKF
AVTSINRNRTLMSNTTLTYDIQRVNFFDSFEASRRVCDQLALGVAAVFGPAHSSSVSAVQ
SICNALEVPHIQTHWKHPVDNKDSFFINLYPEHNSISRAILDVVTYYKWKTLTVVYEDSI
GLMRMQEVIKAPSRNGMKVRIRQLPTGSSDARPLLKEMKKEQEFYVIFDCSYQMASELLK
QLMSMGMMTEYYHFFFTTLDLFALDLEPYRYSGVNMTSFRLLNLDNPYVVSVVQKWSTEW
QFAPYRPESGLMSGMMTTSAALMYDAVFMVAVASQRANQMTVSSLQCHRHKPWRYGPRFM
NLFKEAQWDGLTGRIVLNKTDGLRKDFDLDLISLMEEGTTKIGVWKSYTGLNLTEKRDSS
NNVTDSLVNRTLIVTTILENPYVMYKKSDKVLYGNDRFEGYCLDLLKELSNILGFSYEVK
LVSDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTITYVREKVIDFSKPFMTLGISILY
RKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFIIARFTPYEWYNPHPCNPSSDVM
ENNFTLLNSLWFGIAALMRQGSDQMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVE
RMDAPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRKNTALVKNNR
EGITRVLTTDYALLMESTSIEYISQRNCNLTQVGGLIDSKGYGVGTPIGSPYRDKVTIAI
LQLQEEGKLHMMKEKWWRGNGCPEENNKEANALGVENIGGIFIVLAAGLVLSVFVAIGEF
VYKSRQNSDVEEAFCFYYGVQSRQLQRRDSPSITGTSKSTDLESGHLLEDDVCSLH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatattatcagtttcgatcacggagccatggagaaacgagccaggctgctgctc
tcgctgttgttcctgatgtcgaagttgtgtctcagtgagcaccaggtcctccgaatcggg
ggtatatttgaaactcgggagaatgagccagtgagtgtggatgagttagccttcaaattt
gctgttaccagtatcaaccgcaacagaacactaatgtcaaacactacattgacctacgac
atccagagagtgaacttttttgacagttttgaagcctcccgaagagtgtgtgatcagtta
gctctaggtgttgctgcagtgtttggccctgctcacagttcctcagtcagtgcagttcag
tcaatctgtaatgccctggaggtcccacacatccagacccactggaaacatccagtggac
aacaaggactccttctttatcaatctctatccagagcacaactccatcagcagggccatt
ttggacgttgtgacctactacaagtggaagactctaacagtggtctatgaagacagcata
ggcctaatgcgcatgcaggaggttatcaaagcaccatccagaaatggtatgaaggtgcgt
attcgccagctgcccacggggagcagtgatgctcgcccacttctcaaggagatgaagaag
gaacaggagttctatgtcatttttgactgctcctaccaaatggcctctgagctgcttaaa
cagctaatgtcaatgggaatgatgactgagtactaccattttttcttcactactttggat
ctctttgcacttgacctggaaccctaccgatacagtggcgtgaacatgacttctttccgc
ctgctaaacctggacaacccctatgttgtgtctgttgttcagaaatggagcacagaatgg
cagtttgccccatacagacctgaaagtggcttgatgagtggcatgatgactacatcagcc
gctctaatgtatgacgctgtgttcatggttgcggtggcatcacagcgggccaatcagatg
acagtgagctcactgcagtgccacaggcacaaaccgtggcggtatggaccccgcttcatg
aacctgtttaaggaggctcaatgggatggcctgacaggacggattgtccttaacaagact
gatggactgaggaaagactttgatttggacctcatcagccttatggaggaaggtacaaca
aagattggggtgtggaaatcatacactggtctgaacttgactgaaaaaagggacagctct
aataacgtcacagattctctggtcaacagaacgctgattgttaccacaattttggagaac
ccgtatgtaatgtataagaagtctgataaggtgctttatgggaatgatcgctttgaaggc
tactgtttggatctactgaaggagctctccaatattctgggattcagttatgaagtcaag
ctggtgtcggatggcaagtacggtgcccagaatgacaagggagaatggaacggaatggtc
agggagctcattgaccatattgctgatctggctgtggcacctttgaccatcacttatgtg
cgagagaaagtcatagacttctctaagccatttatgaccctggggattagtatcttgtac
cgtaaacccaatggcaccaaccctggagttttttctttcctcaaccctctcaccccagac
atctggatgtatgtgctgctggcatgtttgggagtcagctgcgtgctcttcattattgct
aggttcacaccatatgaatggtataaccctcatccttgcaatccttcatcagatgtgatg
gaaaacaacttcacgttattaaatagtttgtggtttggaattgcagcactcatgaggcaa
gggtcagatcagatgcccaaggctttatccaccagaattgttggggggatttggtggttc
ttcacactaatcatcatatcatcctacactgctaacctggctgcctttctcactgtggag
cggatggacgcaccaatcgattcagctgatgatctggccaagcagactagaatagaatat
ggagcagtgagagacggttccaccatgactttctttaagaagtcaaagatctcaacatat
gagaagatgtgggcgttcatgagcagcaggaagaacacagccctggtgaagaacaataga
gagggcatcacacgcgtcctcaccactgactatgccctccttatggagtccaccagcata
gaatacattagccagagaaactgtaacctcactcaggttgggggactcatagactccaaa
ggctatggagtaggcacacctataggctcgccttacagggacaaggtgacaatcgccatc
ctgcagctgcaggaggagggcaagctccacatgatgaaggagaagtggtggagggggaat
ggctgccctgaggagaacaacaaggaggccaatgccttgggagttgagaacatagggggt
atctttattgtgcttgctgctggcctcgttctctctgtttttgtggcaattggagaattc
gtctacaaatctcgccagaacagcgatgttgaggaggccttctgtttctattatggggtt
cagtcacggcagctgcagagacgcgattctccctcaatcactggcacatccaaatccaca
gatttagagagtgggcaccttcttgaggatgacgtatgctccttgcattaa
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