Ictalurus punctatus (channel catfish): 108276615
Help
Entry
108276615 CDS
T04658
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ipu04812
]
108276615
Enzymes [BR:
ipu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
108276615
Cytoskeleton proteins [BR:
ipu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
108276615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
LisH
RuvB_N
AAA_16
TIP49
AAA_5
AAA_22
AAA_14
Mg_chelatase
AAA_24
NPHP3_N
RNA_helicase
AAA_28
AAA_7
AAA_25
nSTAND3
Parvo_NS1
AAA_17
IstB_IS21
DUF815
AAA_33
AAA_18
NACHT
ORC-CDC6-like
nSTAND_NTPase5
AAA_2
bpMoxR
TsaE
NB-ARC
Motif
Other DBs
NCBI-GeneID:
108276615
NCBI-ProteinID:
XP_017343909
Ensembl:
ENSIPUG00000024858
UniProt:
A0A2D0SMH5
LinkDB
All DBs
Position
16:20785872..20797458
Genome browser
AA seq
541 aa
AA seq
DB search
MSCRNTMELSYQAIKTANQARETDELRTETRRRNMLILIYHHLMEEGYADAASALEKETN
FGLRRFEVCDNVDLDTVLMEYESFYFIKFQKYPKLTKKLPEQGENGRVRNSGKKRTSSVT
KTLPRIACVQQPQSGNGIKKQESKAAGKDWSGTENGGSYLPERNEFGLNVSPIVRNGAGE
GTQMKKGQLLDYRGLIQDAIKGTCNETAANSLSCHPDPSERLLKPISAFCGMNSEMRELA
AVISRDIYLHNPNVHWDDIIGLEAAKRLVKEAVVYPIKYPQLFTGILSPWKGLLLYGPPG
TGKTMLAKAVATECNTTFFNISASSIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELES
VMGQRGAGPGGEHEGGRRMKTELLVQMDGLARSNDLVFVLAASNLPWELDHAMLRRLEKR
ILVGLPSSPARKAMINHWLPPVSNTGGVELRTELAYDVLAEETDGYSGSDIRLVCKEAAM
RPVRKIFDTLENHSEGHSHMLLIKLETVTTEDFLQVIAHTKPSARKLTERFSAWEREYES
V
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagaaacacaatggagttgtcctatcaagctatcaaaactgcaaaccaggca
agagaaacagacgaattaagaacagagaccagaagaaggaatatgcttatattaatttat
catcatttaatggaggaagggtatgcggatgctgcgagtgcactggaaaaagagaccaat
tttgggttgcgtaggtttgaagtgtgtgataatgttgacttggacacagttctcatggag
tatgaaagcttttatttcattaaatttcagaaatatcccaagctaacaaagaaactgcca
gaacaaggtgagaatggacgtgttagaaactccggtaagaagaggacctcaagtgtgaca
aaaacgctgcccagaatcgcatgtgttcagcaaccacagtccgggaacgggattaaaaag
caagagtctaaggcagcagggaaggattggtctggcactgagaacggaggatcatatctc
ccagagaggaacgagtttggcctcaatgtgtcacccatcgttaggaatggagctggcgag
gggacgcagatgaagaagggtcaactgttggactacaggggtctcattcaggatgctatt
aaaggaacgtgtaatgaaacagcggcaaacagcttgtcctgccaccctgatccttcagag
cggctgctcaaacccatcagtgccttctgtgggatgaacagcgagatgagagagctagca
gccgtcattagcagagatatctatttacacaaccccaacgtgcactgggacgacattata
ggcctggaggctgccaagcgattagtcaaagaggctgtcgtctaccccattaagtaccct
caactgttcacaggaattctctcaccatggaaaggtttgctgctttacgggcctccaggc
acaggaaagactatgctggcaaaagcagtagctacagaatgcaacacaacattctttaac
atctctgcatccagcatcgtgagcaaatggagaggagattctgagaagctggttcgggtt
ttatttgagttggcgagatatcatgctccatccaccatctttctggatgagctggagtca
gtgatgggccagagaggtgctggaccagggggtgagcatgaaggtggcaggaggatgaag
acagagctcctggttcagatggatggactggcacgttctaacgacctggtttttgttctg
gctgcctcaaatctaccctgggagctggaccatgcaatgctgagaagactggagaagagg
atcctcgtgggtctgccttccagtccagccagaaaggcaatgatcaatcactggcttcct
ccagtcagcaatacaggaggggtggagcttcgaactgagctagcctacgatgtacttgca
gaggaaacagatggttactccggctcagatatcaggctggtctgtaaggaagcggcgatg
aggccggtcaggaagattttcgacaccctagaaaatcacagtgagggtcacagccacatg
ctgcttattaagctagaaacagtgaccacggaagatttcctgcaggtcatcgctcacacc
aaaccatcagccaggaagctgacagagagattctctgcctgggagagagagtacgagtct
gtctga
DBGET
integrated database retrieval system
