Ictalurus punctatus (channel catfish): 108276634
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Entry
108276634 CDS
T04658
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108276634
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108276634
Enzymes [BR:
ipu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108276634
Spliceosome [BR:
ipu03041
]
Complex C
Other components
PPlases
108276634
Chaperones and folding catalysts [BR:
ipu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108276634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_TEP1_2nd
WDR55
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_WDR19_2nd
WD40_Gbeta
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_WDR75_1st
VPS11_N
Motif
Other DBs
NCBI-GeneID:
108276634
NCBI-ProteinID:
XP_053542927
Ensembl:
ENSIPUG00000019789
UniProt:
W5ULJ3
LinkDB
All DBs
Position
16:26766879..26774776
Genome browser
AA seq
626 aa
AA seq
DB search
MASGAESESLENKRKLQADEGEEEEEDAWVGPLPTEAAPTKKRKVLEYERVYLDNLPSAA
MYERSYMHRDVITYIACTKTDFLITASQDGHVKFWKKKEDEGIEFVKHFRSHLSVIECIS
VSAEGMLLCTVGDDQAMKVFDVVNFDMINMLKLGFHPGQCEWIYNPGDAINTVACSEKST
GKIHVYDGRGSNQPLHTFHKLHSSPLCQIRLNPRYRVIVSADRAGMLEYWTGLPSEFKFP
RQVEWEYKTDTDLYEFAKCKTFPTSLAFSHDGKKMAAIAADRKVRIFRFLTGKLMRVFDE
SLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKV
INVETNRCVRILGKQENIRVVQLSLFQGVAKTMKAAPTIEMKASDNPALQSTDPDPTIFC
TAFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIVHTTM
GDIHLKLYPVECPKTVENFCVHSRNGYYNGHLFHRVIKGFMIQTGDPTGTGMGGESIWGG
EFEDEFHFSLRHDRPYTLSMANAGPGTNGSQFFLTVVPTPWLDNKHTVFGRTTKGMEVVQ
RISNVKVNPKTDKPYEDISIINITIK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcgcggagagtgaaagtttggaaaataaacgcaaattacaggcggatgaa
ggcgaggaggaggaggaggatgcgtgggtcggaccgctgcctactgaagctgctccaact
aagaagagaaaagtactggagtatgagagagtttatctggataatctgccttctgctgcc
atgtatgagcggagctacatgcaccgtgacgtcatcacctacatcgcctgcaccaaaacg
gatttcctcatcacggcgagtcaggacggtcatgtgaagttctggaagaagaaagaagat
gaaggaatcgagtttgtgaaacacttccgcagccacctgagtgtgattgagtgtatttca
gtcagtgctgaggggatgctgctctgcactgtgggagatgatcaggccatgaaagtgttc
gatgtggtgaactttgacatgatcaacatgctgaagctggggttccatccgggtcagtgt
gagtggatctataaccccggtgacgccatcaacacggtggcctgctcggagaaatccacg
gggaagattcacgtgtacgacgggcgaggcagcaaccagccgctgcacaccttccacaag
ctgcactcgtcccctctgtgtcagatccgtctgaacccgcgctaccgcgtcatcgtgtcg
gccgaccgagccggaatgctggagtactggaccggcctcccgagcgagttcaagttcccc
aggcaggtggagtgggagtataaaaccgacacggacctgtacgaattcgccaagtgtaaa
acctttcccaccagcctggccttctcacacgacgggaagaagatggctgccatcgccgcc
gaccgcaaagtccgtatcttccgcttcctgacggggaaactcatgagagtgttcgacgaa
tcgctcactatgttcacagagctgcagcagatgagacagcagctcccggacatggagttt
ggccgcaggatggcggtggagagagagctggagaaagtggacggcattcgactgaccaac
atcatcttcgacgagacgggacactttgttctgtacggaaccatgctgggcatcaaggtc
atcaacgtggagaccaaccggtgtgtgaggattttggggaaacaggagaacatccgtgtg
gtgcagctcagtctattccagggcgtggctaagaccatgaaggcggctcccaccatcgag
atgaaggcgagtgataaccccgccctccagagcaccgaccccgaccccactatcttctgc
accgccttcaagaagaaccgcttctacatgttcacaaagcgagagccagaagacaccaag
agcgccgactctgacagagacgtcttcaacgagaagccgtccaaagaggaggtgatggcc
gccacgcaggcagaaggcccgaaaagggtctcagacagcgccatcgtccacaccactatg
ggagacatccacctaaagctctatcctgtggagtgccccaaaaccgtggagaacttctgc
gtccacagcaggaacggctactacaacggacacttatttcatcgtgtcattaagggtttc
atgatccagaccggagaccccacgggcacggggatgggaggagagagcatctggggcgga
gagttcgaggacgagttccacttcagtctgagacacgaccggccgtacacactcagcatg
gccaacgctggaccaggaaccaacggctctcagttcttcctcacggtggtgcccacgccg
tggctggacaacaagcacacggtgtttggacggaccacgaaagggatggaggtggtgcag
aggatctccaacgtcaaggtcaacccaaagacagacaaaccgtacgaggacatcagcatt
atcaacattaccatcaagtag
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