Ictalurus punctatus (channel catfish): 108276663
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Entry
108276663 CDS
T04658
Symbol
arhgap23a
Name
(RefSeq) rho GTPase-activating protein 23 isoform X7
KO
K20315
Rho GTPase-activating protein 21/23
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276663 (arhgap23a)
Membrane trafficking [BR:
ipu04131
]
Endosome - Golgi transport
Others
Others
108276663 (arhgap23a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108276663 (arhgap23a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PH_11
Motif
Other DBs
NCBI-GeneID:
108276663
NCBI-ProteinID:
XP_017343992
Ensembl:
ENSIPUG00000016371
UniProt:
A0A2D0SMR0
LinkDB
All DBs
Position
2:34105247..34198343
Genome browser
AA seq
1590 aa
AA seq
DB search
MPKDEDVLQLAYSHDAYLKGNAPFTGEAQNLPTPPPLCYPPRSQPHPSHTSCPAPSLSPH
MGQNQLDNWSRWPGSASSPSPPLDNRTGAPTTTSMAWASEGREAGGVGHSSPAHRTEEIR
YGMTERGRSFSSSISTSPPHQTHHGNNSKDNLSWGSPPKPAPVASSSRSEHTQQALTNWY
YNQVSERERERERERERSNVQSLHHRQRSFSHDRLGELSRTRRANRTNFPQSASQDTLLY
PGQHPHWMQVLPSACQNRSRSENLLRSRFGHSGRSLEALDQVLCPLSPHHERQAWQQQPQ
RQVSHFSSAQMPPGARHVQVHRQQQSQSSEQHRCQQHPPQQHQHSPKHQNQMHSSQHPPQ
SRRLTSCQSVDQEQIGYRSYSPSFNRKSGRILQHAQSFRDPSYTGPRLSWTSLPEGMAPS
PAPSPAPPTCSVSGEGQDGTHRPTNHEREGGEKEPEIQAQVQEVVLRQKPPMGRRAGHVH
RLPLALDDSDPLLFTSDPEEALLKSEGSSSKRHPNGNLAPLSVEDDSLASIPFIDEPTSP
SADLRACHVPASSVVSSGGLKSATAVGTSPVSPTFTFPLSRLSSHDCSSIKSSRRCSYLL
AITTERSKSCDEGLHTLRDDGRVFSRLPKRVKSIFRDGSLDSLADEARSKRHSASELGSI
SYSDVRKEGWLHYKQIHTEKGKKVGSAIRPWRRVFSVLRFGALYLYKDKRDALLKGAALG
GGSEDEQPISLRGCLVDIAYSETKHKNVLRLTTQDFCEYLLQAEDRDDMLEWIRVIGESS
KTDSEELGFSRQALINKKLNDYRKQSPTGNKPDSSPRVPRMTFLLPKADNSSAPPRSPKH
EAKEESSPPKSPWGINFMKKAKKADPKAFGVRLEDCQPASNNKFVPLIVEICCGLVEEMG
LEYTGIYRVPGNNAVVSSLQDQLNKGCDINTAEERWQDLNVVSSLLKSFFRKLPEPLFTD
DKYNDFIDANRMENPSDRLKTLKKLIQDLPDHYFHTLKFLIGHLKTVANHSEKNKMQPRN
LALVFGPTLVRTSEDNMTDMVTHMPDRYKIIETLIQHCAWFFSEEHDKDEKTPVDTEDVQ
PAPNIDHLLLNIGRAGLLGEISDSTNSDSAKSKGSGGSKRDLTAKDFLTTLAIMSAVTRR
RRKRPVAGLLGSSTDDDSEQEPIRADLTVEREGEGKETERCESDTAPRAEAEEDEDEEEE
EDDEGNVEVTVASPGKDKPRMPCEEEAHSVILSEEEDQRSEMKGRGWRGDDARSIVSGYS
TLSTLGRSLASEGRGDDADDERSELVSETDNESGFASRSLTQERPEKRTPPPSNTHTSPE
PTTPRSFLYTYCKPSIPTSTPAPASTAAPPPIPSKRPTPEPVERGTESTARSSTPSTSSS
TASQRLQNRPSFNSHRLIQCDTLARRRLKADKAKARSLDPLEVCSASPTEEEQQSNKGRT
RTSLPESSASHSPKLTPSSGHLLASPPALGSTSGSTSQASLAEQVRARLLGSAEDMRSVG
LRKPLSPETRRRRRAWRRHTVVVSPSDSSHKSAQVSSGVNNNNKPPAPPPKPFILIRRPG
DKPMPGPQRSAADTSSSLRAHTTSQFQECL
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggatgaggatgtactgcagctggcatactctcatgatgcctacctgaaaggg
aacgcgccattcacaggagaggcccaaaatcttcctacgccaccccctctctgctaccca
ccacgttcccagcctcatccaagccacacctcttgccctgccccttctctgtccccccat
atgggacagaaccagctggacaactggagccgctggcccggctccgcctccagcccatcc
ccaccacttgacaaccggacaggcgcacctaccacaaccagtatggcctgggcatcagag
ggccgtgaagcagggggtgtcggccacagcagccccgcccatcgcacagaggaaatccgg
tatggtatgactgagagaggacgatcattctcttcctcgatttccacaagtccaccacac
caaacgcaccacgggaacaacagcaaggacaatttgtcatggggcagcccgccaaaacct
gcaccagtggcaagttcaagccgcagcgaacacacccaacaagccctcactaactggtac
tacaaccaggtgtcagaacgggaacgggaacgggagcgggaacgggaacgctcaaatgtc
caatctttacatcatcgacaacgcagtttctctcacgaccgtttgggagagctaagccga
accagacgggcgaataggactaattttccccagagtgcctctcaggacacgttgctgtac
cctgggcagcatcctcattggatgcaggtcctgccttctgcctgccagaaccgctctcgc
tccgagaaccttctccgcagtcgcttcgggcactcgggtcgctcattagaggctctagac
caggtactttgtcccttgtctccacaccacgagagacaagcctggcagcaacagccccag
aggcaggtaagccattttagctcggcacagatgccacctggtgcccgtcatgtgcaagtt
catcgccaacagcaatcccaatcttcagagcagcaccgttgtcagcaacaccctccccaa
cagcaccaacactcaccaaagcatcaaaatcaaatgcattcatcacaacatccaccacag
agccgccgtttgacctcgtgccagagtgtggatcaggagcagattggctaccgcagctac
agtccctcatttaaccgcaagagtggacgaatcctgcagcatgctcaatcattccgggac
ccatcctacactggcccacgcctcagctggaccagtcttccagagggcatggctccatct
cctgctccatcacctgcccctcctacttgctcagtgtctggcgaaggacaggatggaact
catcgtccgactaaccatgaaagagagggaggggagaaagagccggagatccaagcgcag
gtccaagaggtggttctaagacaaaagccacccatgggccgaagggctggccatgttcac
cgactccctctggcgcttgacgacagtgaccctctacttttcacctcggaccctgaggaa
gccctgctcaagtcagaaggttcttcctccaaacggcatccgaatggtaatctagcaccg
ctctctgtggaggatgactcgctggcctctattcccttcattgatgagccaaccagcccg
agcgcagatctgcgggcgtgtcacgtccccgcctcatccgtcgtgtccagtggcggcctt
aagtccgccaccgctgtggggacgagccccgtctccccaaccttcacctttcccctcagc
cgcctctcgtcccatgactgcagcagcatcaagtccagtcgccgctgttcctacctgttg
gccatcactaccgagcgctccaagtcatgtgacgagggactccacactctcagagacgac
ggccgggtcttctcgaggttgccaaagagagttaaaagcatcttccgcgatgggtctctg
gacagcttggctgatgaggctcgctcgaagcgtcactctgcctcggagctgggcagcatc
agctacagtgacgtaaggaaagaaggatggctgcactacaaacagatccatactgagaag
ggcaagaaggtgggcagtgccattcgtccctggaggcgggttttctcagtgttgcgcttc
ggtgcgctctacctctacaaagacaagcgggatgcgctgctgaagggtgccgccctggga
ggcggatccgaagacgagcaaccaatcagcctccgcggctgcctggtggacatcgcgtac
agcgagacgaagcacaagaacgttctgcgactgaccacgcaggacttctgcgagtacctg
ctgcaggctgaggaccgagacgacatgctggagtggatcagagtgatcggggaaagcagc
aagactgacagcgaggagttgggattctctcgacaagctctcatcaacaagaaactgaat
gactacaggaagcagagtccgacaggtaataagcctgactcatctccccgagtgccacgc
atgaccttcttgctccccaaggccgacaacagcagcgcgcccccacgctcccccaaacac
gaagccaaagaggagagcagtcctcccaagtctccatggggcatcaacttcatgaagaaa
gcgaagaaggcggacccgaaggcgtttggagtccggctggaggattgccaacccgcctcc
aataacaagtttgttcctctgattgtggagatctgctgtggcttggtggaggagatgggt
ctggagtacactgggatctacagagtgccaggtaacaacgctgtggtgtccagcctgcag
gatcaactcaacaagggctgcgacattaacacagcggaggagcggtggcaggacttgaat
gtggtgagcagcctgctcaaatctttcttccgcaagctcccggagcccctctttactgat
gacaagtacaacgacttcatcgacgccaatcgtatggagaatccaagtgaccggttgaag
actttgaaaaaactgatccaagatttgccagatcattacttccacactctgaagtttcta
atcggtcatctgaagaccgtagccaatcattcggagaagaataagatgcagcctcgtaac
ttggcgctagtgtttgggcccactcttgtgagaacatcggaggacaacatgacagacatg
gtgacccacatgcctgaccgctacaagatcatcgagactctcatccaacattgcgcctgg
ttcttcagtgaggaacacgacaaggatgaaaagacgccagtggacacagaggacgttcag
cccgcccccaacatagatcacctcttattgaacattggccgagccggcctcctgggcgag
atctcagactcaaccaacagtgattcagcgaaatctaagggctccggagggtcgaaacgt
gacctcacagccaaggacttcctgacaacgctggccatcatgtctgctgtgactcggagg
cgcagaaaacgtcctgttgccggcctcctgggcagcagcactgacgacgactccgaacag
gagccaatcagagccgatctcactgtggagcgggagggggagggaaaggagacggagcgg
tgtgaatctgacacggctccgcgtgcagaggcagaagaggacgaagatgaggaagaggaa
gaagacgacgaagggaatgtggaagtgactgtggcctcgccaggtaaggacaaacccaga
atgccttgtgaggaagaagcacactcagtgatcctgagtgaggaagaggaccagaggtca
gagatgaaaggtcgcggctggagaggggatgatgcacgttctattgtatcgggttactcc
actctgtctacgctgggccggagtttagcatccgaggggcggggcgacgacgcagacgat
gagcggagcgagctggtgagcgagacggacaacgaaagcggctttgcttcacgctctctc
acgcaggagcgtcctgagaaacgcacgccacctccatcaaatacacacacctcaccagaa
ccgaccacaccacgcagcttcctgtacacgtactgcaaaccctccatacctacttctact
cccgctcccgcttccacagcagcacctcctcccatcccttccaaacgccccacccctgag
cctgtagaaagaggaaccgaaagtacagcacgctcctccactccatccacctcctcctcc
actgcctcccagcgcctccaaaaccgaccctccttcaactcccatcggctcattcagtgt
gacactttagcgcgccggcggctaaaagcagataaggctaaagctcgttcactagatcct
ttagaagtctgtagcgcttcacccaccgaggaggaacaacagtccaacaaagggcgaacg
agaaccagccttccggaatcctccgcttctcactcacccaaactcaccccatccagtggt
cacctcttagcttcaccccctgccctgggctccacctctggctcgacaagtcaggcatca
ctagcagagcaggtgcgtgcacgtctgctcggttcagcggaggacatgcgttctgtgggc
ctgaggaaacctctctcgcctgagacccgccgccgtaggcgggcctggaggagacacaca
gtggtggtctcgccttctgactcctcgcacaaaagcgctcaagtctcctctggcgttaac
aacaacaacaaacccccggccccacccccaaaacctttcattttaatccgacgtcctggg
gataagcccatgcccggtccccagcgctctgcagccgacacctcttcatcgctccgggcc
catactacctcccagttccaggaatgcttgtga
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