Ictalurus punctatus (channel catfish): 108276685
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Entry
108276685 CDS
T04658
Symbol
supt20
Name
(RefSeq) transcription factor SPT20 homolog isoform X1
KO
K21245
transcription factor SPT20 homolog
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108276685 (supt20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108276685 (supt20)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
108276685 (supt20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt20_SEP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
108276685
NCBI-ProteinID:
XP_017343987
Ensembl:
ENSIPUG00000009382
UniProt:
A0A2D0SMQ5
LinkDB
All DBs
Position
16:9827915..9853495
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AA seq
830 aa
AA seq
DB search
MQQDLEYALDRAEYIVESARQRPARRRVSSSGRKSLYQKLYELYMEECEKEPELKNLRRN
VNLLEKLVSQESLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEAELLDYLDAEEL
PPILVDLLEKSQVNIFHCGCVITEVRDYRQSGNTKMPSYQSRHVLLRPTMQTLICDVHAM
TSDHHKWTQDDKLQLESQLILATAEPLCLDPSITVTCTANRLLYNKQKMNTRSMKRYFKR
YSRAALNRQQELANLPTPPQLRLLDYLHKRKERKPLPVVDLKISKAGNCVDMWKQNSCQL
TTPAEIDVEKYAVVEKSIKLEDSQPPQVWPAQDIKDDYVFECEVGGQPQRTKVTIFQSMG
DPLVYGKIYSSSDPKVDEDVSDLHLIHPPFLLGSKVDADRFLCQYKDVYETDLKCEVKIL
HSSGNMGAQSQLSPTRETEVDGFSALVQSSVLGKGVKHKPPPIKLPSGSSTSSSGNPYST
QAPSGHLKCPTPPPNKSQSLSRKHSIELGQVGLLSPAALSPMQRSGTPKPSTPTPTNTPC
STPHPVDIQCATPSVTPTPQDPAMPQPQTLLAPFSQQQMALPVMTIPLPTSISTGTTSSQ
VMTNPAGLNFINVVGSVCSPQTLMAGSNPMLGCSPGINLSGILPSGGLMPSALPAMQSAA
SAGAPFGLNNTQSLRPLNLLQIPATPLIFNPLQQQQISQFSPQQQSSQSATSSPQQQNDS
TEQGLTAEQGLAAQQTAVINLTGVGGFMPSQTVLSQLGCGLEGSGSSLPSPRLQQQHQPQ
IQLQFLQHQMQQQMAMAAGAGPQAALPRQHSANQPRSKRKRSMPQPLPKS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagacctagaatatgcattggaccgggctgagtacattgttgaaagtgctcgt
cagcgaccagctagaaggagagtgtcttccagcgggaggaaatccttgtaccaaaaactt
tacgaattgtacatggaggagtgtgaaaaagagccagagttaaagaaccttagacgaaat
gtgaatctactagagaagttggtctcacaggagtcactgtcatgcctggtggtcaatctg
taccctggaaatgaaggatactccctcatgctccgaggcaaaaatggatctgattcagag
accattcggcttccgtacgaagaagcggagttactggactacttggatgctgaggagctg
ccacctattcttgtggaccttttagaaaaatcgcaagtcaacatatttcactgtggctgt
gtcatcacagaggttcgagattacagacagtcagggaacaccaagatgccgtcttatcag
agccgccatgtactgctgagacccactatgcagaccctgatctgtgatgtccatgccatg
accagcgatcaccacaagtggacgcaggacgataaactgcagctggagagccagttgatc
ctggccacagcggagcctctgtgcctggacccttcaatcactgtcacatgcactgccaac
cggctgctatacaacaagcagaagatgaacacgcgctccatgaaacggtattttaagagg
tactcacgagcagcgctgaaccggcagcaggagctggccaaccttcccacgcctcctcag
cttcgcctgctggactacctgcacaagaggaaagagaggaaacctctgccggttgtggac
cttaagatctctaaggctgggaattgtgtggacatgtggaaacaaaatagctgccagcta
actactccagcagagattgatgtggagaagtatgctgtagtggagaagtcaatcaaacta
gaggattctcaaccgccgcaggtttggcctgcacaggacataaaagatgactacgtgttt
gagtgtgaagtgggtggccagcctcagaggacaaaggtcactatctttcagtctatgggt
gacccgctggtatacggaaaaatctacagcagcagtgacccaaaagtagacgaggatgtg
tctgacctgcacctcattcacccaccattcctcctaggttcgaaggtagacgctgatcgg
tttttgtgtcagtacaaggatgtttacgagaccgatctaaagtgtgaggtgaagatattg
cacagctccggcaacatgggagcccaaagccagctctctccgacaagggagacagaggtg
gatggtttctcagcattggtccagtcctcagtgttgggaaagggagttaagcacaaacct
ccgccgatcaaactgccctctggttcctccaccagctcctcaggtaatccttacagtaca
caagcacccagtggccatctgaagtgtccaacccctccaccaaacaagagtcaatctctg
tcgcggaagcactccatcgagctgggccaggtgggcctgctgtctcccgctgctctctct
cccatgcaaagatctggaacacccaagccatctacacccacgccaaccaacaccccatgc
tcaacacctcacccagtggacattcagtgtgccacaccctcagtgacacccacaccccag
gacccagctatgccccagccgcagacactactcgcccccttctcccaacaacaaatggcg
ctgcctgtcatgaccatccctctacccacctccatcagcacgggtaccacttcctcgcag
gtcatgaccaaccctgctggcctcaacttcatcaacgtggttggctctgtctgcagtcct
cagactctcatggctggctctaatcccatgctgggttgtagtcctggaataaaccttagt
ggaattttgccttcaggaggcctgatgcccagtgcacttcctgccatgcagtctgcagct
tctgcaggtgcaccttttggtctgaacaacacccaaagcttgaggccactcaatcttctt
cagatccctgctacaccattgatctttaaccccttacagcaacagcagatctcacagttc
tctccccaacagcagagcagtcaatctgctacttccagtccccagcagcagaacgattcg
actgaacagggactgactgctgagcagggccttgcagcacaacagaccgctgtcatcaac
ctcaccggggtggggggattcatgccttcccagacagttctgtcccagctgggttgtggt
ctggagggctctgggtccagcctgccgtccccgaggctccagcagcagcaccagccacag
atccaattgcaattcttgcaacaccaaatgcagcagcaaatggctatggcagcgggggcg
gggcctcaggcagcgctgccacggcaacattccgccaaccaaccaagaagtaagaggaag
cgcagcatgccccagcccctccccaaatcatga
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