KEGG   Ictalurus punctatus (channel catfish): 108276710
Entry
108276710         CDS       T04658                                 
Name
(RefSeq) synaptobrevin homolog YKT6
  KO
K08516  synaptobrevin homolog YKT6
Organism
ipu  Ictalurus punctatus (channel catfish)
Pathway
ipu04130  SNARE interactions in vesicular transport
ipu04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:ipu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    108276710
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108276710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ipu04131]
    108276710
Membrane trafficking [BR:ipu04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    108276710
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 108276710
NCBI-ProteinID: XP_017344035
Ensembl: ENSIPUG00000006559
UniProt: A0A2D0SP23
LinkDB
Position
16:complement(125819..134906)
AA seq 198 aa
MKLYSLCVLYKGSNKANLLKAAYDLSSYSFFQRSSVQEFMTFTSSLIVERTGLGSRASVK
EQEYLCHVYVRNDCLSGVVIADSEYPSRVCFTLLDKVLEEFSRQVDSIDWPSGSPTTVQY
TALDSYLAKYQNPREADAMTKVQAELDETKIILHSTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEVM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctctacagtttgtgtgtgttgtacaaaggctcgaacaaggccaaccttctcaaa
gcagcctacgatttgtcttcgtacagtttttttcagagatccagtgtacaagagttcatg
acgttcaccagcagcctgatagtcgagcgcaccggattaggaagccgcgcgtccgtcaaa
gaacaagaatacctgtgtcacgtgtacgtccggaacgactgtctcagtggagtcgtgatc
gcagacagcgagtacccctccagagtctgcttcactttgcttgataaggtgttggaggaa
ttctcccggcaagtggacagcatagactggccttcaggctcaccgactactgttcagtac
accgccttagacagctacctggccaagtaccagaacccgcgtgaagccgatgccatgacc
aaagtgcaagctgaactggatgaaaccaaaatcatactgcacagcacaatggagtcactc
ctggaaagaggagaaaagctggatgatttggtacagaaatcagagcacctgggaaaccaa
tcaaaagccttttacaaaacggcacggaaacagaactcttgctgtgaggtgatgtga

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