Ictalurus punctatus (channel catfish): 108276719
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Entry
108276719 CDS
T04658
Name
(RefSeq) huntingtin-interacting protein 1-related protein
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108276719
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108276719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
HIP1_clath_bdg
I_LWEQ
Motif
Other DBs
NCBI-GeneID:
108276719
NCBI-ProteinID:
XP_017344061
UniProt:
A0A2D0SNI4
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All DBs
Position
16:5698347..5716839
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AA seq
1249 aa
AA seq
DB search
MSKDKSEKKDKSEKALAAEKEQFVKLQLQSISKCITSTEAPIKERYGRNILLGTHWESGA
VTFWSHAVSLPLASNAIFSWKFCHMVHKLLRDGHPNTLRDSQGHVPSIKQMGTLWGSLHD
RYGHIVALYAKFLCIKIEFHCKHKAILPDLAAPDEVLERAIAVDINEVFETTGEVLEYMD
AALVLQETVFRQLESNNTSATTAVGQCRLAPLVPLLQDCSPLYHFLVKLLFKLHSRIPMD
ALLDYRERFRDQFNSLSQFFEKARSIEFFKAIIQIPDFPDTPPNFLRAASLADYVKPVVV
HNQLPEDDDTETQVEGNPMFHSFDQYDGPVQREKEVESMRKELEAMRPEVQMFKAEAQRA
IVHLKDQVNKLEAELEDQRTRKQMAMVENEQLRMEVEALRAQTAVAASMQASVDDSRVQT
AQMHFTRLKEKHAELVTRHADLMRKNADMVKQLASTQQAQEELVKAKQQIAEGLEHLKQE
NSTKLEAQQAEIIQLRQELQTGKAEIINVQSALQSKEKAGDQLSGVLLGLQAEKETLMRS
LKEQEAELANLRQSSQLNQTTLQQERDKTQKEMSSLQSQLQEKVSREIEQQMELEKLKKE
LELKRAEALSVQSALQSKEAAGDQLSSVLVGLQAEKEILMRTLKEQEAELAKLRQAALLH
QITLQQERDKYQKEIDSLNSQLQEKVQREQEQQLEIARLKRELEERRAEATSAQNALHSK
ETAGHEMSSVLVGLQAQKETLMRSLKEQEAELANLRLAAQQHQTMLQQEKDKTQREMSSL
QSQLQAKLSRETELQQKLQEEQFCLLQCAVVEAEGIILDALSKVDDPMHVRCVCTPEYLI
NRAEITLVSIDKMQQSHAGYLRNLDDASGLLRSVTQFSHLAADTIVNGAAASHSAPTDQA
DRLTDNCRDCATHCLQFLKELKLQATLQRADPSAIRYTVQRILNQATDLRHNDTDVPKAE
LADMVDKEMAATSTAIEEAVLRMEEILSQARRDTSGLKLEVNQSILGSCSDLMKAIHMLV
TAATDLQKDIVESGRGAGSVKDFYAKNSCWTEGLISASKAVGWGATQMVDSADKVVTDRG
KYEELIVCSHEIAASTAQLVAASKVKADRGNKKLNTLLQASRHVNDMAAVVVTSTKAGQM
QIEDKDPMDFSGMSLIKLKTEEMETQVKVLELENQLSNERQRLGELRKKHYELAGVPLDQ
TAEKDFDGFVSVLPPVMPEPPKPEPSKNPTSKRPSIFQKSGSLLKNKFR
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaagataaaagtgaaaaaaaggacaaatctgaaaaggctctggcagcggaaaaa
gaacaatttgtcaaacttcagctgcagagcatttcaaagtgcataacctccactgaggcg
ccaataaaagagagatatggacgcaatatcctattaggaacacattgggaaagtggagcg
gttactttctggtcccacgctgtgagtttgcctcttgccagcaatgccatcttcagctgg
aagttctgccatatggtgcataaactcctacgtgatggccatcctaataccctgcgagat
agccaagggcatgtcccaagtataaaacaaatgggaactttgtggggaagcctccatgat
cgatatgggcatattgtcgctctgtatgcgaagttcctgtgcatcaaaattgaattccat
tgtaagcacaaagcgattctgccagatcttgcagctcctgacgaggtccttgagagggct
attgcagttgatataaatgaagtgtttgaaaccactggtgaggtgctagaatatatggat
gctgcgcttgtattacaagaaacagttttcagacaactcgaatccaacaatacgagtgcg
acgactgcagtgggtcagtgccgcctagcgcctctggtcccgcttctccaagactgcagc
cctctctatcacttcctcgtcaagctcctgtttaagctacacagccgaatacccatggat
gctctgttggactatcgtgaacgattccgtgatcagttcaacagtctttcccagttcttc
gagaaagccaggagcattgagttctttaaagctatcatacagatccctgattttcctgat
acccctccaaacttcctgcgtgcagcttcattggctgattatgttaagccagtggtggtt
cataatcagcttcctgaagatgatgatacagagactcaggtggaaggaaacccaatgttc
cattctttcgaccagtacgatggacctgtccagagggagaaagaggtcgagtctatgagg
aaagagcttgaagcaatgagacctgaggtgcagatgttcaaagcagaggctcagcgtgcc
atcgtccacctgaaggaccaggtgaataagttggaggcggagctggaagaccagcgcact
cgcaagcagatggccatggtggagaacgagcagctgcgcatggaggtggaggcattaagg
gcacagacagcagtcgctgcgagtatgcaggcctctgtagacgacagcagagttcaaact
gcccagatgcatttcactcggcttaaagaaaagcatgctgagctggtcaccaggcacgct
gatctcatgagaaagaatgccgacatggtgaagcagctggccagcactcagcaagcccaa
gaggagctggtcaaggccaagcagcagatcgcagaaggcctggaacatctcaaacaggag
aacagtaccaagcttgaagcacagcaagcagaaatcatccaattaaggcaagagcttcag
acgggaaaagctgaaataataaatgttcagagtgcactccagagcaaagaaaaggcaggg
gaccagctgagtggtgtgttgttgggacttcaggctgagaaggaaacattgatgcgttct
ctgaaagagcaggaggctgagcttgctaacctgcgccagagctctcagctgaaccagacc
acgctgcagcaggagcgagacaagacccagaaagagatgagctccctgcagagccaactc
caggaaaaagtgagtcgagagattgagcagcagatggagttggagaaactgaagaaagag
ctggagttgaaaagagcagaggcactaagtgtgcagagtgcactacagagtaaagaggcg
gcaggagatcagctgagcagtgtgttggtggggcttcaggctgagaaggaaatactgatg
cgtactttaaaagagcaggaggctgagcttgcgaaactgcgccaggctgctctgctgcac
cagatcacgctgcagcaggagagagacaaataccaaaaagagattgactccctgaacagc
cagctacaggaaaaggtgcagcgggagcaggaacagcagctggaaatcgctcggctgaaa
cgagagttggaggagaggagagcagaagcgacaagtgctcaaaatgctcttcacagcaag
gagacggcagggcatgagatgagcagtgtgttggtggggctgcaggctcaaaaggaaaca
ctgatgcgttctctgaaagagcaggaggctgagcttgctaacttgcgcctggctgctcag
cagcaccagaccatgctgcagcaggagaaagacaagacccagagagagatgagctccctg
cagagccaactacaggccaagttgagccgggaaacggagctccagcagaagctgcaggaa
gagcagttttgcttattgcagtgcgctgtggtggaggcagagggcatcattctagacgct
ctttccaaagtggatgaccctatgcacgtgcgctgtgtttgcactcctgagtatttgatc
aatcgagctgagatcactctggtgtccattgacaagatgcagcaaagtcatgcggggtac
ttaagaaatctggatgatgccagtgggctgttgagatctgtgactcagttttcccacctt
gcagcggacactattgttaatggagctgccgcgtcccactctgcacccactgaccaggct
gacaggctgacagataactgcagagactgtgccactcactgtctgcagttccttaaagag
ctcaagctgcaggccacactgcagagagctgacccgagcgccatccgctacacggtccag
cgcatcctcaaccaagccactgatttacgacacaatgacacagatgttccgaaagcagag
ctggcagacatggtggataaagagatggctgccacctccactgctattgaggaagctgtt
ctgaggatggaggaaatattgagccaggcaagaagagatacatcgggattaaaattggaa
gttaaccaaagcatccttggttcctgttctgatctgatgaaggccatacacatgttggtc
acagcggccacagatttacagaaggacatcgtggaaagtggtcggggagctggctctgtg
aaagacttctatgccaagaattcctgctggactgaggggctcatctctgcctccaaagct
gtaggatggggagccacacaaatggttgattctgctgacaaagtagtgacagaccgaggc
aaatatgaggaactgatagtgtgctctcacgagattgctgccagcactgcccagctcgta
gctgcctccaaggtaaaggcagatcgaggtaataagaaacttaatacattgctgcaagcc
tcacgacatgtaaatgatatggctgcagttgttgtgacctcgacaaaagctggacagatg
caaatcgaagataaggatcccatggatttctctggcatgtccctgatcaaactgaagaca
gaggaaatggaaactcaggtgaaagtgttagagctggagaatcagttgtccaacgaacgc
cagcggctgggcgagctgaggaaaaagcactatgagttggctggagttcctctcgatcag
accgcagagaaagattttgatgggtttgtcagcgttttacctccagtgatgcctgaacca
cccaaacctgagccttctaaaaacccaacatctaaaagaccttctattttccagaaatct
ggcagcctccttaaaaataagtttaggtga
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