Ictalurus punctatus (channel catfish): 108276742
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Entry
108276742 CDS
T04658
Name
(RefSeq) spliceosome-associated protein CWC27 homolog isoform X3
KO
K12737
peptidyl-prolyl cis-trans isomerase SDCCAG10 [EC:
5.2.1.8
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108276742
03110 Chaperones and folding catalysts [BR:
ipu03110
]
108276742
Enzymes [BR:
ipu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
108276742
Spliceosome [BR:
ipu03041
]
Complex C
Other components
PPlases
108276742
Chaperones and folding catalysts [BR:
ipu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
108276742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Yos9_DD
Motif
Other DBs
NCBI-GeneID:
108276742
NCBI-ProteinID:
XP_017344130
Ensembl:
ENSIPUG00000019850
UniProt:
A0A2D0SPC0
LinkDB
All DBs
Position
16:26605817..26677755
Genome browser
AA seq
474 aa
AA seq
DB search
MSNIYIQEPPTNGKVLIKTSAGDIDIELWSKEAPKACRNFIQLCMEGYYNGTIFHRVVPD
FIIQGGDPTGTGTGGESIYGRPFKDEFHSRLRFIRRGLVAMANAGPHDNGSQFFFTLGRA
DELNNKHTIFGKVTGDTVYNMLRLAEVECDGDERPLKPHKIRTTEVLHSPFDDIVPRETR
VKKDKHKEEAKKSQSKATKNFSLLSFGEEAEEEEEMVTQVSQTMKGKSKSSHDLLKDDPK
LSSVPVVDSRTSPGDASEGDDETQDQDDDDDDEDDDDKKVRKKEMRERISKKLKKEKMEE
EKSEAQEETEKKSSRSDELRKEARQLRKELLAIKQRKEERMKPEENSAGEKKATGEAVSE
YLESKKKYEEMRTQKLKKGSSREAQTLALLDRFKTKLSSAISETPEAPDDEELEEDDDKG
WMTHVLQFDEQSRKVKDANMQDEDTFEIYDPRNPVNKRRREESKKLLKEKKAKR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatatttatattcaagaaccaccaacgaacggcaaggttttaataaagacctca
gcaggtgatatagatatagaactttggtctaaagaagctcctaaagcctgcaggaacttc
attcagctctgtatggaaggttactacaacggaaccatattccaccgcgtggttccagat
ttcatcattcagggcggtgatccgactggcactgggaccgggggggagtccatctacggc
cgtccttttaaggatgagttccactccaggttgcgctttattaggagaggtctggtggcg
atggctaatgccggacctcacgataacggcagtcagtttttcttcactctgggccgagct
gatgaactcaataacaagcacacaatatttggaaaggtgacgggtgacacggtgtacaac
atgttacgcttagccgaggtggagtgtgacggcgacgagcgaccgttaaagccgcacaag
atcagaactacagaggtcttacattctccctttgatgacatcgtgcctcgtgagacgcga
gtcaagaaagacaaacacaaagaggaggcaaagaaatctcagtccaaggcaacgaagaat
ttcagtctgctgtcgttcggtgaggaggcggaagaggaagaggaaatggtcactcaagtc
agccagaccatgaaaggaaaaagtaaaagcagtcatgaccttctgaaggacgaccccaag
ctgagctccgttcccgtggtggacagcagaacaagtccaggagacgcttcagagggagat
gatgaaacacaggaccaggatgatgatgatgatgatgaggatgatgatgacaaaaaggtg
aggaagaaggaaatgagagagcgcatctcaaaaaagctgaagaaagagaagatggaggag
gagaagtctgaagcgcaggaggagacggagaagaagagcagtcgcagcgatgaactccgt
aaagaagctcgtcagctgaggaaggaactcctcgcgatcaagcagcgaaaagaagagagg
atgaagccggaggagaacagcgcaggagagaagaaagcgacgggcgaggccgtgtccgag
tacctggagagcaagaagaagtacgaagaaatgagaactcaaaagctgaagaagggttcg
agcagagaggcgcagacactcgctcttctggaccgttttaagaccaagctgtcatcagcg
atttccgaaaccccagaggcacctgacgacgaggagctggaagaggatgacgataaagga
tggatgacgcacgtgctgcagtttgatgaacaatccaggaaggtgaaggacgcgaacatg
caggacgaagacacgttcgagatctacgacccgcgcaaccccgtcaacaaacgcagacgg
gaagagagcaagaaactgctgaaggagaagaaggccaagaggtga
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