Ictalurus punctatus (channel catfish): 108276781
Help
Entry
108276781 CDS
T04658
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108276781 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108276781 (abca3b)
Transporters [BR:
ipu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108276781 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
AAA_15
RsgA_GTPase
AAA_23
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
108276781
NCBI-ProteinID:
XP_017344222
Ensembl:
ENSIPUG00000011856
UniProt:
W6A339
LinkDB
All DBs
Position
2:21890246..21938558
Genome browser
AA seq
1710 aa
AA seq
DB search
MAVWRQFGLLLWKNYLQQKRQILVTLVEITLPLLFSAILIVLRQKVSFTNYPNATHYDSF
SLEQPPDKLPIGLQLAYVPANSSIVRQVAEDVQLSLEHGTISAVRGFETEHQFEEFVKTD
PESAKILAAVVFEHLFTQDDEPLPLQVRYHLRFTYNPRNAPPKEKSELNPNNDLDWHTLG
LFPLVQLPGPREQHDSYGGTPGYYREGFLMVQHAVDRAIMKAYNRTAATALFMQTRVVLS
RFPYPAYIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAIVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFFIFLSISIFFVTLLFCVQVSPNGAVLTYSDPTLVFVFLLVFAVATISFCFM
ISSFFSRANVAAAASGFLYFFSYLPYLFMWPRYDLLSHAQKVSVCLISNVAMAMGAQLIG
MFEGKGMGIQWSNLFEPVTVDDDFSLGQVLGLLLLDSILYSLVAWYIEAVFPGEYGVPRP
WYFFILPSYWCNSPRFALLKEKEEEEDAEKVLKGEFIEEEPTGLISGVKIKHLAKVFKMG
NKTKEAVKDLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMV
LIRRSLGLCPQHDVLFDNLTVREHLLFYAQLKGYPREKIPDEVDRIIRILKLEDKRSARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRSRTILLTTHF
MDEADLLGDRIAIMADGELQCCGSPLFLKNKYGAGYHMVIVKDVLCNVSEISRLVHMYVP
NATLESSAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTVDDTSSISGMTDVTDFTDSGTLISEDCSNIKLN
TGAKLYMQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVVALVVAQTLPGQHKTPELPL
ALSRYGPTTVPMALDSNAGPLATALAEAYAAQLAAQSARPVTNLTDFSEYVLNNAMMEGG
AFNERCVVGAAFRGRTTRFAEITGYFNNQGYHTPATALMLVDNALYRLLAGPSASIQTGN
NPMPRNVSETAQSQFSEGQTGFAIAINLMYGMASLASTFALLLVIERAVKSRHVQRVSGV
YLSNFWFSALLWDLINFALPCLLMLVVFRAFGVKAFVEENHMVDVLLLLLLYGWAVIPLM
YLLSFLFSSAATAYTRLTIFNIISGTATFLAVTIMTIPELQLQNLSRLLDKVFLLFPNYC
LGMSFSQFYRNYETISFCTTSFLTKDICHLYNITYQLNYFSMNEPGVGCYLVAMSLQGVV
FLVLLFVIELQCINTLFSLCRRCKKGMLIGEEALQPEDRDVADERKRVLECQPVVESMVG
SPLILQELTKVYPGSQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDETVTAG
DAFIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVFACVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAVT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKIHME
ADLEEMDLQHFKDFIESIFPGSVLKDEHQGMVHYHLTDKTLTWAQVFGTLEAAKEKYRIE
DYCVSQISLEQVFLSFAQFQHCSEGQRKSH
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtggcgacagtttggcctacttctctggaagaactacctacagcaaaagcgt
cagatcttggtgacgttggtggagatcacactgcccctcctgttctctgccatcctgatt
gtactgcgtcagaaggtgtcctttaccaactaccccaatgccacgcattacgatagtttc
tcactggaacagcctcctgataagttgcccataggcctgcaactcgcctacgtgccggca
aattccagcatagtacgccaggtggctgaggatgtgcagctcagtctggaacatggcacc
atcagtgctgtgcgtgggtttgagactgagcatcagtttgaggagtttgtgaagacagac
cctgaatcagcaaagatcctggcagcagtggtgtttgagcacttgtttactcaagatgat
gaacctctcccacttcaggtcaggtatcacctgcgcttcacctataacccccgaaatgct
cctcccaaggaaaaatcagagctgaatccaaacaatgaccttgactggcacactctcggc
ctgttccccctcgttcagttgcctggacctcgagagcagcacgattcttatgggggcact
ccaggttattaccgtgagggcttcctaatggttcagcatgctgtggatcgagccatcatg
aaggcctacaacaggacagcagcgactgccctcttcatgcagacacgggtcgtgctgtca
cgcttcccttacccggcttacatctatgatgtcttcatcctggccatccagaaccagctg
cccctcttgctagtgctcagcttcacctacacttccctcaatattgtccgagccatagtg
caggagaaggaaagaaaactcaaggaatacatgagaatgatgggtctgagtaactggctg
cactggagtgcctggttcctcatgttcttcattttcctctccatctctatcttctttgtc
accttactcttctgtgtccaggtgagtccaaatggagcagtgctgacctatagtgaccct
acactagtcttcgtcttcctccttgtttttgccgtggctactatcagcttctgtttcatg
atcagctccttcttctccagagctaacgttgcagcagcagcaagtggtttcctctacttc
tttagctacctgccatacctcttcatgtggccacgttatgacctgctatcccacgctcag
aaggtttctgtctgtctcatctccaatgtagcgatggctatgggtgcccaacttattggc
atgtttgaaggcaaaggcatggggatccagtggagtaatctgtttgagcctgtgactgtg
gatgatgacttctcactgggtcaggttcttgggctcttgctgctggactccatactctac
agcctggtggcttggtacatagaggctgtcttccccggcgagtatggagtgccacgacca
tggtactttttcatactgccctcatactggtgcaacagccctcgatttgccctgctgaaa
gagaaggaggaagaagaggatgcagagaaagtgctgaaaggagagttcattgaagaagag
ccgacaggattaatctctggggtcaaaatcaagcacctggccaaggtttttaaaatgggc
aataagactaaagaagcagtgaaggatctcacattaaacatgtatgaaggccagatcacg
gtgctgctaggacacaacggagccggaaagactaccacactgtctatgctgactggcttg
tttcctcccagcagtggccgagcttacatcaatggctacgatatatgccaggatatggtt
ctgatccgccgcagcctaggcctgtgcccacaacacgatgtgctttttgacaacctcaca
gtcagagagcatctgcttttctatgcccagctgaagggttaccctcgtgaaaagattcca
gatgaggtggaccgcatcatccgtatcctaaaactggaggataagaggagtgcacggtca
aagaccctttcaggtggaatgaagcgcaagctttctatcggaattgcacttattggagac
tcgaaggtggtgatgctggacgagcctacctctggcatggacccatcagccaggcgagcc
acatgggatcttttgcagggcgagaaacgaagtcgtaccatccttctcaccacgcacttc
atggacgaggcggacctactgggagaccgcattgctattatggctgatggggaactccaa
tgctgtggctcacctctcttcctcaagaacaaatacggtgctggctaccacatggtgata
gtaaaagatgtgttgtgtaatgtatcagagatcagccgcctggtccacatgtacgtcccc
aatgccaccctggagagtagcgctggggctgaactttcctacatcctgccaaaagagagc
actagccggttcgagcttctgtttgctgaactggaaatgaacagagaggagttgggcatc
gcaagctatggagcatctgttaccaccatggaggaagtttttcttagggtcgggaagctg
gtggactccagtctagacattcaggccattcagcttccagccctgcagtaccagcatgag
cgaaggtcacatgactggacggttgacgatactagcagtatcagcggcatgactgatgtg
actgacttcaccgatagtggcacactgatctcagaggactgctccaacatcaaactcaac
acaggggctaagctgtacatgcagcagttctatgccatgttcctgaagagggcactgtat
agctggcggaactggaaggtgatggtggcacagtttttagtgccacttatcttcacagta
gtcgcccttgtggtggctcagactctccctgggcagcacaaaaccccagaacttccccta
gcactcagccgctatggccccaccactgtgcccatggccctggattctaatgctggaccc
ctggctacagcgcttgctgaagcctatgctgcccaacttgctgcccagagcgccagacca
gtgaccaacctaactgacttctctgagtatgtactgaacaatgccatgatggaaggagga
gccttcaacgagcgctgcgtggtgggtgctgcttttcgtggccgaactacgaggtttgct
gaaatcactggctacttcaacaaccaaggctaccacacaccggctactgcgctcatgctg
gtggataatgcactgtacaggctcctggctggccccagcgcttccatccagacaggaaac
aatcccatgccccgtaacgtgtcagagacagcccagagccagttctcagagggtcagact
ggctttgccatagccattaacctaatgtatggaatggcatccttggccagtaccttcgcc
ctgctcctggtgattgagcgcgctgtgaagtccaggcacgtacagcgggtcagcggagtc
tacctctccaacttctggttctctgcattgctctgggatctgatcaactttgcactgcct
tgtcttctaatgctggttgtgttccgtgcgtttggggtgaaggcctttgttgaggaaaat
cacatggtagatgtgctgcttttgttgctgctctatggctgggctgtgattccactaatg
tacctgctcagcttcctgttctctagtgctgccactgcttacacacgcctcaccatcttc
aacatcatcagtggcacagccaccttccttgccgtcaccatcatgaccatccctgagctg
cagctgcagaatctttcacgtttactggataaagtattcctgctattccccaactactgc
ctgggcatgtcctttagccagttctaccgaaactacgagaccattagcttctgtaccacc
agcttcctcactaaagacatctgccatctttacaacatcacctatcagctaaattacttc
tctatgaatgaacccggagtgggctgctacttggtggccatgtccctgcaaggtgtggtt
ttcctcgtccttctcttcgtcatcgagctccagtgcatcaatacactcttcagcctctgc
cggagatgcaagaagggtatgctgatcggagaagaagcccttcaacctgaggatagagac
gtggccgatgagagaaagagggttttggaatgccagcctgtggtggagtccatggtgggc
agtcctcttattctgcaagaacttaccaaggtgtacccagggagtcagtctctgctggca
gtggaccgcttgtccctggctgtggggaaaggtgaatgctttggcctgctaggttttaat
ggagctggaaagacaactacgtttaaaatgctgactggagatgagactgtgactgcaggg
gatgccttcatcgatggctacagtattctccgcgatgtgaagaaggtacagcagcgaatc
ggctactgtcctcagtttgatgctgtgctggatcacatgactggccgtgagactcttagc
atgtatgcaaggctcagaggaatccctgagaaatatgtgtttgcatgtgtggagaatgtg
ctccgctcattgctcctggagccacacgctgacaaactggtccgcagttacagtgggggc
aacaagaggaagctgagtgcaggtatggctctgattggcgggccacctgtcatcttcctg
gatgagccgtccactggcatggaccccgtggccagacgcttgctctgggatgcagtcaca
cgcaccagagaatctggcaaagccattattatcacctcacacagtatggaggagtgtgag
gctttgtgcactagactggctgtgatggtcaatggacagttcaagtgtctgggcagccca
cagcatctaaagagcaaatttggcagtggatacacactgttggccaaaatccacatggag
gctgatttagaggagatggaccttcagcactttaaagacttcatcgagagcatcttccct
ggtagcgtactgaaggatgaacatcagggaatggtacattatcatttgactgacaaaaca
ttaacctgggctcaggtttttgggacacttgaggcagctaaggagaaatataggattgag
gactattgtgtgagtcagatctcattggagcaagttttcctgagctttgctcagttccag
cactgttcagaaggccagcggaaatcacactga
DBGET
integrated database retrieval system
