Ictalurus punctatus (channel catfish): 108276828
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Entry
108276828 CDS
T04658
Name
(RefSeq) long-chain fatty acid transport protein 4
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03320
PPAR signaling pathway
ipu04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
108276828
09158 Development and regeneration
04382 Cornified envelope formation
108276828
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ipu01004
]
108276828
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108276828
Lipid biosynthesis proteins [BR:
ipu01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108276828
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
108276828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
108276828
NCBI-ProteinID:
XP_017344321
Ensembl:
ENSIPUG00000020449
UniProt:
A0A2D0SPA3
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All DBs
Position
16:26300880..26320856
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AA seq
643 aa
AA seq
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MLRLACTTVLLFVLRLVLALPWFQVLPAVVIFFLGTGGWDSLRVFMKTIGRDLHAAVVLL
KVKLNVKRHLHERNTIPKIFAESVQKYGDKTALIFEGTGERWSFRQLDEYSNRVANLLHE
RGFREGDVVALFMENRSQYVGLWLGMAKMGIEAALINFNLRLEALVHCVNISNAKAVVFG
SELTDAMCEVHSSMGKSVKLFCSGDWDPKRVPEGTECLEPLLQAAPTHKPSQPQRGFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFRMRSEDVLYDCLPLYHSAGNIVGVGQ
CLIHGMTVVIKKKFSASKFWEDCIKYNCTIVQYIGEICRYLLNQPVRDVEQRHRVRMALG
NGLRQSIWEEFMQRFNVPQIAEFYGATECNCSLGNFDNKTGACGFNSRILPFVYPIRLVR
VNEETMELIRGPDGVCIPCGPGEPGQLVGRIIQNDPLRRFDGYVNQSATSKKIAQSVFKK
GDSAYLSGDVLVMDEFGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVE
VPGAEGKAGMAAIADPDHTTDLGRFSRELEKALPPYARPVFLRFLPEVNKTGTYKFQKTE
LRRDGFDPTVVSDKLYFLDCTKGCYVELDAKLHHSIASGKQKV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttacggctggcgtgtaccaccgtcctgctcttcgtgctcaggctggtcctggctctg
ccctggtttcaggttcttcctgctgtcgtcatcttcttcctgggaaccggaggatgggac
tcgctgcgtgtgtttatgaagaccatcggccgagacctgcatgccgccgtagtgctgctg
aaagtgaagctgaacgtgaagcgacacctgcatgagcgtaacaccatccccaagatcttc
gccgagtcggtacagaagtacggcgacaagacggcgctgatcttcgagggcacgggcgag
cggtggagcttcaggcagctggacgagtactcgaaccgtgtggccaacctgctgcacgag
cgcggcttcagggagggcgacgtggttgctctgttcatggagaaccgctcgcagtacgtc
ggtctgtggctgggcatggccaagatgggcatcgaggcggcgctcatcaacttcaacctg
cgtctggaggccctggtgcactgcgtcaacatctccaacgccaaagccgtggtgtttggc
agcgagctgactgacgcgatgtgtgaggtgcacagctccatggggaaatccgtaaagctc
ttctgttctggtgattgggatcccaagcgagtacctgagggaaccgagtgtttagagcca
ctcctccaggccgcacccacacacaagcccagccaaccacagcgcggcttcaccgatcgt
ctcttctacatttacacatctggaactactggaatgccgaaagctgcgatcgtcgtccac
agcaggtattaccgtatggctgctctggtgtattacggtttcaggatgcggtcggaggac
gtgctgtacgactgtctcccgctttaccactcggcagggaacattgtgggcgtcggccag
tgtctgatccacggcatgaccgtcgtcatcaagaagaagttctcagcatccaaattctgg
gaggactgcatcaaatataactgcacgatcgtgcagtatatcggtgagatctgtcgttat
ttgctgaatcagccggtgcgggatgtggagcagcgtcaccgtgtgcgcatggcgctgggt
aacggtctgcgtcagtccatctgggaggagttcatgcagcgctttaacgtaccgcagatc
gcagagttctacggcgccactgagtgtaactgcagcctcggcaacttcgataacaagacc
ggtgcgtgtggctttaacagccgtatcctgcccttcgtctaccccatccgtctggtcaga
gtgaacgaggagaccatggagctcatcagaggacctgatggagtgtgtataccatgtggt
ccaggtgaaccgggtcagctggtgggcagaatcatccagaatgaccccctgagacgcttt
gacggctacgttaaccagtccgccaccagtaaaaagatcgcacagagtgtctttaagaaa
ggggacagcgcttacctgtcaggagacgtgctggtgatggacgagttcggctacatgtac
tttagagaccgtacgggagacacgttccgctggaagggtgagaacgtctccactactgag
gtggagggaacgctgagccgcctgctggacatgaaggacgtggtggtgtacggtgtcgag
gtcccaggtgcagagggtaaagccggcatggcggccatcgcagacccggaccacaccaca
gacctggggaggttcagcagggagctggagaaggcgttgcccccctacgcccgcccggtg
ttcctgcgcttcctgcctgaggtcaacaagaccggaacctacaagttccagaagacggag
ctacgccgcgacggtttcgacccgaccgtggtgtctgataagctctacttcctggactgc
actaaaggatgctacgtcgagctggatgccaaactgcaccatagcatcgcctcggggaaa
caaaaagtttaa
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