Ictalurus punctatus (channel catfish): 108276832
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Entry
108276832 CDS
T04658
Symbol
hnrnpd
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein D0 isoform X1
KO
K13044
heterogeneous nuclear ribonucleoprotein A/B/D
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ipu03041
]
108276832 (hnrnpd)
Spliceosome [BR:
ipu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108276832 (hnrnpd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
CBFNT
RRM_3
Nup35_RRM_2
NID
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
108276832
NCBI-ProteinID:
XP_017344329
Ensembl:
ENSIPUG00000024954
UniProt:
A0A2D0SPW8
LinkDB
All DBs
Position
16:complement(19535384..19541994)
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AA seq
309 aa
AA seq
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MEEQFIEDPVMKMEEDGEASVEGQIQAVSDGGPGESEGSKIDASKNEEDEGKMFVGGLSW
DTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKEAESVEKVIQQKEHKLNGKV
IDPKKAKAMKSKEPVKKIFVGGISPDTPEEKIREYFHAFGEVESIELPMENKTNKRRGFC
FITFKEEEQVKKIMEKKYHNIGLSKCEVKVAMSKEQYQQQQWGGRGGFSSRGRGRGGPNQ
NWNQGYGNYWNQGYGNYGNYGYNNQGYGGYGGYDYSGYNYYGYGDYSNQQSGYGKSPRRG
GHQNSYKPY
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagttcatcgaagatccggttatgaagatggaggaagacggagaagcgagt
gtggaaggacagatacaggcagtcagtgatgggggtccaggagaaagcgagggatcgaag
attgatgcgagtaaaaacgaggaagatgaagggaaaatgtttgttggaggcctgagctgg
gacacaacgaagaaggacctaaaagattactttgccaagtttggggaggttgtagactgc
actttaaagctggatcctatgactggtcgatccagaggctttggcttcgtgctgtttaaa
gaggctgaaagtgtggaaaaggttattcaacaaaaagaacacaaacttaatggaaaagtg
attgacccaaaaaaagcaaaagccatgaagtccaaggaacctgtgaagaagatctttgtt
ggtggcatttcaccagacactcctgaagagaagatcagagagtatttccatgcttttgga
gaggtggagtctattgagttgccaatggaaaacaaaacaaataaaaggcgaggattctgt
ttcatcaccttcaaagaggaggaacaagtgaagaaaatcatggaaaaaaagtaccataat
attggcctaagcaagtgtgaagtcaaagtggccatgtcaaaggagcagtaccagcagcag
cagtggggtggaagaggtggcttctcctctcgaggtcgtgggagaggagggcctaatcaa
aattggaaccaggggtacggaaactactggaatcaaggatatggaaattatggaaactat
ggctacaacaatcaaggctatggtggatacgggggctatgattactcgggttacaactac
tacggatatggtgactacagcaaccagcagagtggttacggcaaatctccaaggcgaggt
ggccatcaaaacagttacaagccatactag
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