Ictalurus punctatus (channel catfish): 108276847
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Entry
108276847 CDS
T04658
Symbol
nipblb
Name
(RefSeq) nipped-B-like protein B isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108276847 (nipblb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ipu03036
]
108276847 (nipblb)
Chromosome and associated proteins [BR:
ipu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108276847 (nipblb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
ARM_ECM29
Cnd3
Motif
Other DBs
NCBI-GeneID:
108276847
NCBI-ProteinID:
XP_053543014
Ensembl:
ENSIPUG00000004101
UniProt:
A0A9F7TR93
LinkDB
All DBs
Position
16:complement(1536920..1570558)
Genome browser
AA seq
2651 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVNCLLARRDDN
LVSQLVHSLNQVSTEHIELKDNLGSDDPEGDMPVLLQTVLSRNPNIFREKSMPTRFGVQG
GIMQQPMMPPYKMPQNSMHGSPASTNYQQTPVTPSPPSRFVQPQTGSGARFIPQQNSPVP
SPYAPQSPAGYMQYPHPPTYSQHQQIQVSVASPMVPGMRNIHDNKVSGQMSSNSANHNAR
HCSNEEYMNIVHRLGNEESDPSIRNASFPLRSPQSVCSPAGSEGTPKVGSRPPLILQSPP
PYTSPRDAAPDLLMDSPERKKKQKKMIKEEGEKGAMYDIVSSPSKDSTKLTLKLSRVKSA
EAEQAGELMSGGMEQGSDAENDLPCNSFREQSGYQQVPVLQNTGALAAKQPGAVSGTPYD
EAELDALAEIERIERESAIERERCSKEVQDKDKPLKKRKQDSYPQEPGAAGTAGTAGGPG
VGGGGSAGNKPTPQEASAASNGANRPALMVSIDLQQAGRAEGQLECPVPAQEAQRWAEDG
SDSAGVLRLKSKTDEELQRAADGRPEVIKQQKTASDGRPETPKHKQDSRRDSSGKVQGSD
KRPDPSKHRHDGKPDKIRPETPRKDGRPELSRDGHREEKHKDRERDRERSSDGSKIRRPE
TPKSSSRLEQERPGRDRDRDKDRDKDRDKDRDRERKHRSESRDHRDRRSPEHRSRPDSPR
VKQESRSGPDSGRPRTDLKSPNSKEERRSADGTRKSTDGSKLPPPDSRAGEFPEFLLSSK
SSALKNFVIPKLKRDKDGNAEPRRPGEIWSQPRVKLERLGLVEDISKRSKPVVVLQKLSL
DEVQKIIKERHATSSKSSKNRPSYGKSSKGAIDESVLKELPPHLLAEIESTMPLCERVKM
NKRKRSTANDKPKYAEVSSDDDSVSESAPKRSKKERDRTWEYEDKKVSGERRRSGGYNEG
RRGSGSRYREHSPDDSGNETPPPSISDVFKKMKMKEKQKKRKAYEPKLTPEEMMDSSTFK
RFLASVDNILENLEDVDFTSLNADDDEIPQELLLGKHQLSELGSESAKIKAMGITYRIPS
DKLVKVLSILEKNIQDGAKLSTLMNHDTEAEDEERLWRDLIMERVTKSADSCLMALNIMT
SSRMPKAVYIEDVIERVLQFTKFHLQNTLYPQYDPVYRVDPHGGGMLSSKAKRAKCSTHK
QRVIVMLYNKVCDIVSNISELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVT
AVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQ
CVVHLPSGKDHTDDEYEKKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEEDYRPL
FENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTVAARLR
KDAVTSKMDQRSIDRILREVSGNDETQQLQKALLDYLDENVETDPSLVFARKFYIAQWFR
DTTTETEKAMKSQNQKDDDTAEGAHHAKDIETTGEIMQRAEKRKQFLRLIIRTTPAQFGT
LKMNSDTVDYEDACLVVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKCLSEVV
AVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLTEQYYDMLIERILDT
GISVRKRVIKILRDICLEQPTFNKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPN
HDKETMTRKIINITDVVSACRDSGYDWFEQLLQNLLKTEEDASYKPTRKACVQLVDNLVE
HILKYEEESLSDCESKGVNSNRLVSCITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNNQN
DFMVICNVAKILELVVPLMDHPSETFLTTIEEDLMKLIIKYGMTVVQHCVSCLGAIVNKV
THNYKFVWACFNRYYGALNKLKTQHQEDPNSTVLVSNKPALLRSLFTVGALCRHFDFDRE
EFKGNNKVVIKDKVLELLLYFTKNEDEEVQTKAIIGLGFLFIQHPGLMFVPDVKTLYNGL
LSDRKKSVNLKIQVLKNLQTYLQEEDSRMQEADREWKKLSKQEDLKEMGDISSGMSSSIM
QLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPTMRNKAD
QQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAIMASRNTIIRGFRHDESSSALCSHLFTMV
RGNRQHRRAFLISLLNLFDDSAKTEVNMLLFIADNLACFPFQTQEEPLFIMHHIDITLSV
SGSNLLQSFKESLLKDSRQREKKKKKKEREKKYCSEEDDDDDYVHEEVPESGRGSGSSSD
EDDEVVRRSKKAKRAAVNSDSESELEADDVDKVMDRLPDNPMPLLDFANASQGILLLLVL
KQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKTNVHFNPRQTLDFLTNSLSNAELTYE
VKRRIVRQYLDFKVLMEHLDPDEEDEEGEASASAHARNKAITALLGGSSPKNNAAESYDE
DSDGDEKMPGSSRRSKRGGDSADASGHMNETVEAMDVIAICCPKYKDRPQIARVIQKTSN
GYSVHWMAGSYSGTWAEAKKRDGRKLVPWVDTIKESDIIYKKIALTSAHKLTNKMVQTLR
SLYAAKEGTSS
NT seq
7956 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattaccactcttgctgggattgctagcctcact
gacttgttaaaccagctgcccttgccttcccctctccctgccaccaccactaagagcctg
ctgtacaatgggaggatcgccgaggaggtcaactgtctcttggcccgcagggacgacaac
cttgtctcccagctggtccacagccttaaccaggtctccaccgagcacatagagctgaag
gacaacctgggcagcgatgacccggagggcgacatgccggtgctgctgcagacggtgctg
tccaggaaccccaacatcttcagggagaaaagtatgcccacccgattcggggttcagggc
ggtataatgcaacagccaatgatgccgccatacaagatgcctcaaaattccatgcacggc
agcccggcatccacaaactaccagcaaacccctgttactcccagccctcctagtcgcttt
gttcagcctcagacgggctccggggcccggttcataccccagcaaaacagccctgtgccc
agcccgtatgcccctcagagccctgccggttacatgcagtaccctcatccacccacctac
tctcagcatcaacagatccaagtctctgtggctagtcccatggtgcctggtatgagaaac
atccacgacaacaaggtctccgggcaaatgtcaagtaactcagccaatcacaacgcacgg
cattgctccaatgaagagtacatgaacatagtccacagactgggaaatgaggagagcgat
ccttctattagaaacgcctccttccccctccgatcgccccaatccgtgtgctcgcctgct
ggaagcgaagggaccccaaaagttggatcacggccgcctctgatcctccagtccccgccc
ccgtacacctcaccgcgagacgccgctcctgacctcctcatggactcgcctgagcgtaag
aaaaagcagaagaaaatgatcaaggaggagggtgagaaaggcgccatgtacgacatagtc
agctcaccctccaaagactccaccaagctgacgctgaagctgtcgcgggtcaaatcggcg
gaggcggagcaggccggcgaactcatgtctggcggcatggagcaaggctcagacgcagag
aacgatctgccctgcaacagctttcgggaacagtcagggtaccagcaggtcccggtgctg
cagaacacaggggcgctcgctgccaaacagcctggagcggtcagcgggacgccctacgac
gaggctgagttggacgccttggctgagatcgaaaggatagaacgcgaatcggcaattgaa
cgggagcgctgctctaaggaggttcaggataaagacaaacccctgaagaagcggaaacag
gactcttaccctcaggagcccggtgctgctggtactgctggtactgctggaggccctggc
gtaggcggtgggggcagtgcagggaacaaaccaactcctcaggaggctagtgctgccagc
aacggggctaaccgtccagcacttatggtcagcatagacctgcagcaggcaggaagagcc
gaggggcagctcgaatgccctgtgcctgcccaggaggcccagcgttgggccgaggacggc
tctgactcggccggggtactgcgactcaagtcaaaaacggacgaggagttgcagagggcg
gccgacggacggcccgaggttataaagcagcagaaaacggcttcagacggccgccccgag
acgccgaaacacaagcaggacagccggcgcgactcctcaggaaaggtgcagggctcggac
aagcggccggacccgtcgaagcacaggcacgacggcaagcctgacaaaatccgtcccgag
accccccgaaaagacggccgccccgagctttcccgggacggccacagagaggaaaaacac
aaagatagagagcgggacagggagcgcagcagcgacggctccaaaatccgaaggccggaa
acaccaaaatcctccagcagattagagcaggagcgccccggtcgagacagggacagagac
aaggaccgagataaagacagagacaaagaccgagatcgtgagcgtaaacaccggtctgaa
tccagagatcaccgggacaggcgctctcccgagcaccgctcccggcctgacagtccccgc
gtgaaacaggaaagccgaagcgggccggattcgggtcggccccgcaccgacctcaaatct
cccaacagcaaagaggagaggcggagcgctgacggcactagaaaaagtaccgatggctcc
aagctgcctccccccgacagcagagctggagagtttcccgaattccttctaagcagcaag
tctagtgcgctgaagaacttcgtcattcccaagctgaaacgggacaaggacgggaacgcg
gaacccagacgacccggggagatttggagccagcctcgggtgaagctagagaggctcggg
ctggtagaggacatcagcaaacggtccaaacccgtcgtggtgcttcagaagctctccctc
gacgaggtgcagaaaatcatcaaggagaggcatgcgaccagctccaaatccagcaagaac
aggccttcgtatgggaagtcctcgaaaggggccatcgacgagtctgtgctcaaggagctt
cctcctcatctgctcgctgaaatcgagtccaccatgcctctgtgtgagagggtgaagatg
aacaaacgcaaacgcagcacagccaacgacaagcccaagtatgccgaggtcagctcggat
gatgacagcgtatcagaatcggccccgaagcgatcgaagaaggagcgggatcggacgtgg
gagtacgaggacaaaaaagtttcaggagagcgcaggcgtagcggaggctacaacgagggc
cgcagagggtcgggcagccgataccgagaacacagtccagacgactccgggaacgagact
cctcctcccagcataagtgacgtattcaaaaagatgaagatgaaggagaagcagaaaaag
aggaaagcctacgagccgaagctgactccggaagaaatgatggactcttcgacattcaag
aggttcttggcaagtgtggacaacattttagaaaacttggaggatgtggacttcacgtcg
ttaaacgcagacgatgacgagatccctcaggagctgctccttgggaaacaccagctgtcg
gagttgggcagcgaatcggccaaaatcaaagcaatgggcatcacgtacaggattccatcc
gacaagctagtaaaagtgctgagcatactggagaaaaacatacaggacggcgccaagcta
tccacgctcatgaaccacgacaccgaggcagaggacgaggagcggttatggcgcgacctc
atcatggagcgggtgaccaaatcggccgactcctgcctgatggctctcaacatcatgacc
tcgtcgcgcatgccgaaggccgtctacatcgaggacgtgattgagagggtgctgcagttc
accaagttccatctgcagaacaccttataccctcagtatgaccccgtctacagagtggac
ccacacggaggtggcatgttgagctcaaaagcaaaacgggccaagtgttccacacacaag
caaagggttatcgtgatgctctacaacaaagtgtgcgacatcgtcagcaacatctcggaa
ctgctggagatccagctactaaccgacactacaatcctgcaggtctcttcgatggggatc
acgccattcttcgtggagaacgtcagcgagcttcagctctgcgccattaagctggtcacc
gctgtcttctcccgttatgagaaacacaggcagctgattctcgaggagatcttcacctct
cttgcaaggctcccgaccagtaagagaagcttgaggaacttcaggttgaacagtagcgac
gtcgacggggaacccatgtacatccagatggtgacggctctggtgctgcagctcatccag
tgcgtggtgcatcttcccagcgggaaggaccacacagatgacgagtacgagaagaaagtg
gaccaggatgtcctcatcacaaactcttatgaaaccgcaatgaggacggcacagaacttc
ctctctgttttcctcaaaaaatgcggcagcaaacagggagaggaggactatcggcctttg
ttcgaaaactttgtgcaggaccttctctcgacggtcaacaaaccggagtggcccgctgcc
gagctgctgctcagtctcctcggccggttactggtgcaccagttcagtaacaaacagact
gagatggcactcagagtggcctctttggactacctgggaacggtcgccgcccgtctgcgc
aaagacgccgttactagcaaaatggaccagagatctatagaccgcatcctccgagaggtg
tccggcaacgacgagacccagcagcttcagaaagccctgttggattacctggatgaaaac
gtggagaccgacccctctcttgtgtttgcgaggaagttctacatcgcgcagtggttcaga
gacaccactacagagaccgagaaggccatgaagtctcagaaccagaaggatgacgacacc
gcggaaggagcgcaccacgccaaggacatagagaccacgggcgagatcatgcagagagcc
gagaagcgcaagcagttcctgcggttgatcatcaggaccactccggcgcagtttggcacg
ttgaaaatgaactcggacactgtggattacgaagacgcctgtttagtcgtgcgatatttg
gcctctatgaggccgtttgcacagagctttgatatttatttaacgcagatcttgagagtg
ctgggagagagtgctattgctgtgagaacgaaagcgatgaagtgtctgtcagaggtggtg
gctgtggatcccagcattctggctcggtcggacatgcagcgcggagtccacggtcgactg
atggataactccaccagcgtgcgggaggccgctgtagagctgctcggccgattcgtgctg
agtcgtcctcagctgactgagcagtactacgacatgctcattgaaaggatcctggatacg
ggcatcagtgtgagaaagagggtgattaagatcttgcgagacatctgtctggagcaaccc
accttcaacaagatcaccgagatgtgtgtgaagatgatccgaagggtcaacgacgaagaa
ggcattaagaaactggtgaatgaaacattccagaagttgtggttcactccgactccaaac
cacgataaggaaaccatgaccaggaagatcatcaatatcactgatgtggtgtctgcatgc
agggattctggttacgactggttcgaacagctgcttcagaacttgttgaagacggaggaa
gacgcctcctacaagccaacccggaaagcctgcgtccagctcgtcgacaatctagtggag
cacatcctcaaatacgaggaggagtcgctcagtgactgtgagagtaaaggggtgaattca
aaccgattggtgtcctgcatcaccaccctgtacctgttcagcaagatccgagcgcagctg
atggtgaaacacgccatgaccatgcagccctacctgaccaccaagtgcaacaaccagaac
gatttcatggtcatttgtaacgtagctaaaatcttagagttggtggtgcctctgatggac
catcccagcgagacctttctcaccaccattgaggaagacctgatgaagctcatcatcaaa
tacggaatgacggttgtgcagcattgtgtaagctgtcttggggcaatagtgaacaaggtc
actcacaactacaagtttgtctgggcttgttttaaccggtactatggggctctgaacaag
ctgaagacccagcaccaggaggacccgaacagcacggtgctagtgtccaacaagccggca
ctgctgcgttctctcttcaccgtaggagctctttgcaggcactttgactttgaccgagag
gagtttaaaggaaacaacaaggtcgtcataaaggacaaggtgttggaactgcttctgtat
ttcactaagaacgaagatgaggaggtgcagacgaaggccatcattggtttgggtttcctg
ttcatccagcacccaggtctaatgttcgtccccgacgtaaagactctgtacaacggcctc
ctgtccgacagaaagaagtcagtaaacctaaagatccaggtgctgaagaatctacagacg
tacttgcaggaagaggactcccgaatgcaggaagctgacagggagtggaagaagctctcc
aagcaggaggacctgaaggagatgggtgacatctcgtcgggtatgagcagctccatcatg
caattgtacctcaagcaggtcctggaggccttcttccacacacagtccagtgtacgtcac
tttgccctcaacgtcatcgctctgacgctcaaccagggtctcattcaccctgtacagtgc
gtcccctatttgattgccatgggaaccgatcccgagcccacaatgaggaacaaagcggac
cagcagctggtggaaatcgataagaagtacacaggatttattcacatgaaggctgtggcg
gggatgaaaatgtcctaccaagtccagcaggccataatggcgtcccggaacacgatcatc
cggggtttccgtcatgacgagtccagctcggcgctctgctcgcaccttttcaccatggtg
cggggaaaccggcagcaccggagagccttcctcatctctctgcttaatctgttcgacgac
agcgcgaagacggaggtgaacatgctgctgttcatcgccgacaacctggcgtgtttcccg
ttccagacccaggaggagccgctcttcatcatgcatcacatcgacatcacgctgtcggtg
tccggcagcaacctcctgcagtccttcaaagagtctttgctaaaggactctaggcagagg
gaaaagaagaagaaaaagaaggaacgggaaaagaaatactgctccgaggaagacgacgac
gacgactacgtgcatgaagaggttcctgagagcggcaggggaagcggcagcagcagcgac
gaagacgacgaggtcgtccggaggtccaagaaggctaagcgggctgcggtgaactccgat
tcggagtcggagctggaggccgacgacgtggacaaggtcatggaccgtctgccggacaac
cccatgccccttctcgattttgccaacgcctctcaaggcatcctgctcctcctggtgctc
aaacagcacttaaagaacctctacggcttctccgacagcaaaatccagaagtactcgccc
accgagtcggcgaaagtgtacgacaaagcggtgaacaggaaaaccaacgtgcattttaac
ccacggcagacgctggacttcctgaccaacagtctgtccaacgcagagcttacctacgaa
gtcaagagaaggatcgtcaggcaatacttggactttaaggtactgatggagcacttggat
cccgacgaagaggacgaggaaggcgaggcgtcggctagcgctcacgccagaaacaaagcc
atcaccgctctgctgggaggctccagcccgaaaaacaacgccgccgagtcgtacgacgag
gacagcgacggagacgagaaaatgcctggatcgtcacggagatccaaaagaggcggcgat
tccgcagacgcatcaggtcacatgaacgaaacggtagaagccatggacgtcatcgccatc
tgttgccccaagtacaaggaccggccgcagatagctcgcgttatccagaagacgagcaac
ggttacagcgtgcactggatggccggctcgtactccggcacttgggccgaggccaagaaa
cgggacggacgtaaactggtgccttgggtggacactatcaaggaatcggacatcatttac
aagaaaatcgccttgacgagcgcgcacaagctgactaacaaaatggtgcagactttacgc
tcactgtacgcagccaaggaggggacttccagctaa
DBGET
integrated database retrieval system
