Ictalurus punctatus (channel catfish): 108276854
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Entry
108276854 CDS
T04658
Symbol
itga2.2
Name
(RefSeq) integrin alpha-2 isoform X3
KO
K06481
integrin alpha 2
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03271
Virion - Rotavirus
ipu04145
Phagosome
ipu04510
Focal adhesion
ipu04512
ECM-receptor interaction
ipu04810
Regulation of actin cytoskeleton
ipu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
108276854 (itga2.2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108276854 (itga2.2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108276854 (itga2.2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
108276854 (itga2.2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
108276854 (itga2.2)
04810 Regulation of actin cytoskeleton
108276854 (itga2.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ipu04147
]
108276854 (itga2.2)
04515 Cell adhesion molecules [BR:
ipu04515
]
108276854 (itga2.2)
04090 CD molecules [BR:
ipu04090
]
108276854 (itga2.2)
Exosome [BR:
ipu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
108276854 (itga2.2)
Exosomal proteins of bladder cancer cells
108276854 (itga2.2)
Cell adhesion molecules [BR:
ipu04515
]
Integrins
Integrin alpha subunits
108276854 (itga2.2)
CD molecules [BR:
ipu04090
]
Proteins
108276854 (itga2.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
VWA_2
HisK_sensor
ITGAX-like_Ig_3
Integrin_alpha
FN3_IL27B_N
Motif
Other DBs
NCBI-GeneID:
108276854
NCBI-ProteinID:
XP_047016746
Ensembl:
ENSIPUG00000021817
UniProt:
A0A979F958
LinkDB
All DBs
Position
16:25439802..25478469
Genome browser
AA seq
1075 aa
AA seq
DB search
MSLGLTLIRTTKNAGFMTCGPLWAQGCGSQYFYPGVCAEVSPLFVPQPAFSPALQTCGGP
MDIAIVLDGSNSIYPWPPVVEFLKKLLGHLDIGPQQSQVSIIQYGVDPKMEFKLNAYKTR
ASIVQAASAIPQRGGIETNTFRAIEYARVNAFLPANGGRPGASKVMVVVTDGESHDNSRR
NTVIPACEKDGITRFGIAVLGYYIRNNIDSKKLVEEIKSIASNPADKYYFNVSAEEALLE
IAGTLGDRIFNIEGTGTGGEFQMELSQVGFSAHQTKNQDVMMLGAVGAYGWTGTVVHKTA
QTSEIFPKGAFEQILEDKNHSSLLGYSVSTLYSGSTEYFVAGAPRSNHTGQVVVYTLNKR
RQPDIRHSQRGDQIGSYFGSVLCPLDVDRDGVTDLLLVGAPMYMSDAKKEMGKVYIFTVT
DGFLSSQGFLEGSSRLENARFGMAISAASDLNLDGLTDVVVGAPLEENGQGAVYIYNGDA
RSIRKQSSQKILAVKLDPTLRYFGRSLDAAGDLNGDSVPDVSVGSYGKVLQLWSRGVAVV
TARVTFTPDMINIESKPCSFSGRKVSCFIAKVCFSAAFKPTTPVGPAEIKYNMTLDADLR
SSRFSSRGQFGNSERVVQQNVGVSTAETCEEHQVYVQDTPDLESIAVRVDIGLQQPDSSP
VLDAFSPSAWEFFIPFIKDCGGDDMCYSDLVLSVEREPPSSLLLVSKNNRLSLSVTVMNR
KENAYNTRVIARFSSNLFYSSVTPPSDDTEVKCTSSKDTEIVTCQVGYPALRTDQLVTFE
INFDFNLARLQKEVKVAFEAQSDSKEETPADNSETMAIPIQYRTEIILSREANMNVYLLD
EKDEITNPIKTYSDIGPELKFNLKVSGAVFPVSLVYLDVSLPVSTKSGNHLLYVTSVEST
PQSDVQCETQALIDPFKIRDKEYTATFTKESFRGTSHLNCDSAVCKQLKCVLKDLSVKSD
YYISVSARIWNGTFAEADFQSVVLDVNAQIETSQSDLLVIAHKQVTVDVTVSKPGAKADV
PVGVIVGSVIGGLLLLAVAVAVLWKLGFFKRKYQQLQRGDDGAEAEGLQDNAGQQ
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgggtctgaccctgatacgaaccaccaaaaacgccggatttatgacatgtggt
cctctctgggctcagggttgtggttctcagtatttctacccgggagtgtgtgcggaagtg
agccctctgttcgtcccgcaaccagcgttctctcctgctctacaaacttgcggcgggccg
atggacatcgctatagtcctggacggatctaacagtatttatccttggcctcctgtcgtg
gagtttcttaagaagctcttaggacacctcgatatcggaccgcagcaatctcaggtcagc
atcattcagtatggcgtcgatcccaaaatggagttcaagctgaacgcttataaaaccaga
gcgtcgatcgttcaggcggcttcggcgattcctcagagaggtggaatcgagacgaacacg
tttcgagccatcgagtacgccagggtgaacgcttttctgcctgcaaacggaggacgtccg
ggtgccagtaaagtgatggtggtggtgactgatggagagtcacatgataactcccgaaga
aacacggtcattccagcgtgcgaaaaagacggcattacccgtttcggcatcgctgtgctc
gggtactacataaggaataacatcgacagcaaaaagcttgtcgaggaaatcaagtcgata
gccagcaatcctgcagataaatattatttcaacgtgtccgccgaagaggctctcttggag
atcgccggaaccctgggagatcggatcttcaacatcgaaggcacgggtacaggcggtgaa
tttcagatggagttgtcgcaggttggcttcagcgcacaccagaccaaaaaccaggacgtg
atgatgctcggggccgtcggggcgtacgggtggaccggaactgtagtgcataaaaccgct
cagacgtcagagattttccccaaaggagcttttgagcaaatccttgaagacaaaaaccac
agttcgctcctgggatactcggtgagcactctgtatagcggttccaccgagtactttgta
gccggtgctcctcgctccaaccacacgggtcaggttgtggtgtacacactgaacaagcgg
agacaacccgacatccgacactcacagagaggcgatcagatcggctcgtacttcggaagt
gtgctctgtccgctcgatgtggatcgtgacggggttactgaccttctgctggtcggcgct
ccgatgtacatgagcgacgcgaagaaggagatgggcaaagtctacatcttcaccgttacc
gacgggttcttgagtagccaggggtttctggaaggttcctctagactggagaacgctcgg
ttcggaatggccatctccgctgcttctgacctcaacctggacggcttgaccgacgtggtg
gtcggagcgccgctggaggagaacggccagggagccgtttatatttataacggagacgct
cggagcatcaggaagcagagctcacagaaaattcttgccgtgaaactggacccgacgttg
aggtacttcggacgctccttagacgccgctggagatctgaacggagactcggtcccggac
gtctcggtgggcagttatgggaaagtgcttcagctctggtccaggggagtggcggtggtg
acggcccgggtcacgttcaccccggacatgatcaacatcgagagtaaaccgtgtagcttc
agtggacggaaggtgtcctgttttatagccaaagtctgcttcagcgcagcgttcaaaccg
acgacgcctgtcggacctgcagagattaaatacaacatgacgctggacgctgacctgcgg
tcgtctcgattcagctccagaggtcagttcgggaactccgagcgagtggtccagcagaac
gtcggcgtgtccacggccgagacgtgtgaggaacatcaggtgtacgttcaggacactcca
gacctcgaatccatcgccgtccgagtcgatatcggactccagcagccggactccagcccc
gtcctggacgccttcagtcccagcgcatgggagttttttatcccatttattaaagactgt
ggtggtgatgacatgtgctacagcgacttggtgttgagcgtcgagagagaaccaccaagc
tccttgttgctggtgagtaagaacaatagactgtcactgtccgtgacggtgatgaacagg
aaggaaaatgcctacaacaccagagtgatagcacgcttctccagcaacctgttctacagc
tccgttacgccacctagcgatgataccgaggtcaaatgcacctccagtaaagacaccgaa
atcgtcacgtgtcaagttggatatccagcgctcaggactgaccagttggtgacattcgag
atcaattttgactttaatttggcacgattacaaaaggaagtcaaagtggccttcgaagcc
cagagtgacagtaaagaggaaactccagcggataacagtgagacgatggcgatccccatc
cagtacaggaccgagatcatcctcagcagagaagccaacatgaatgtttacttgctggat
gaaaaggatgaaattacaaatccgataaaaacgtacagtgacatcggcccggagttgaag
ttcaatctcaaggtgtctggagcagtgtttccagtcagtctggtttacctcgacgtctcg
ctgcccgtcagtactaaatcagggaatcatctgctgtatgtgacctcagtcgagagcaca
ccgcagagtgatgttcagtgtgagacccaagcgctgatcgacccgtttaagatcagagac
aaagaatacacagccacattcaccaaggagagcttccgaggaaccagtcacctgaactgc
gactcggccgtgtgtaagcagctgaagtgtgtgctgaaagacctgagcgtgaaaagtgat
tactatatcagcgtctccgcgaggatctggaacggaacgttcgccgaggctgatttccag
tcggtcgtattagacgtgaacgctcagatcgagacgtctcagtctgatctactcgttatc
gcccacaaacaagtgacggtcgatgtcactgtgagtaaaccaggtgccaaagctgatgta
cctgtcggagtgatcgtgggcagcgtgattggaggattactcctgctggctgttgctgtc
gcagtgctgtggaagctgggcttctttaagcgtaaataccagcagctgcagagaggcgat
gacggtgctgaagcagaaggactacaggacaacgcaggacaacagtga
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integrated database retrieval system
