Ictalurus punctatus (channel catfish): 108276910
Help
Entry
108276910 CDS
T04658
Symbol
msi2a
Name
(RefSeq) RNA-binding protein Musashi homolog 2a isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108276910 (msi2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ipu03019
]
108276910 (msi2a)
Messenger RNA biogenesis [BR:
ipu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108276910 (msi2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
108276910
NCBI-ProteinID:
XP_017344499
Ensembl:
ENSIPUG00000021097
UniProt:
A0A2D0SP70
LinkDB
All DBs
Position
16:complement(2158616..2376231)
Genome browser
AA seq
409 aa
AA seq
DB search
MDGDGSQATSGSPSDTQHDPGKMFIGGLSWQTSPDSLREYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVDDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPAAAYGPVAAAVAAARGSGRGARGRGSYVAYPQNPGPGFPDYGFYSAPSDQRGAPC
SFADYGSLGPQAAQMLQSEHATSACNSPLQHLHSPDQFKSPGLYGANPARPGAFPGANSP
GPVADLYGPTSQESAVGNYISAASPQPGSGFSHGIAGPLIATAFTNGYH
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatggagacgggagccaagccacgtccggaagcccgagcgacacgcagcatgacccg
ggcaaaatgtttatcggtggcctgagctggcagacctcaccagacagccttagagaatat
ttcagcaaattcggagagatcagagaatgcatggtgatgcgagaccccacaaccaaacgc
tcaagaggcttcgggttcgttacgttcgctgacgcggccagcgtagataaagtcctagct
cagccgcaccacgaattagactcaaagacgatcgaccctaaagtggccttccctcgccgc
gctcagcctaagatggtcacaagaacgaagaaaatatttgtgggtggtctgtcagcgaac
acagtggtggacgacgtgaagcagtatttcgagcagttcgggaaggtagaagacgctatg
ctaatgttcgacaagaccactaacagacacagaggctttggcttcgtaaccttcgagaac
gaagacgtcgtagagaaagtctgtgaaattcatttccatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaagaggtgatgttccccccgggcacacggggcagggcc
aggggtctgccctacaccatggacgccttcatgctgggaatgggcatgctgagttacccg
aacatcgtggcgacgtatgggcgtggatacactggatttgctccgagttatagctaccag
tttcccggtttcccggcagcggcgtacggtccggtggcggcggcggtggcggcggcacga
ggctcaggtaggggcgcccgaggaagaggcagctacgtggcgtacccacagaacccgggg
ccaggctttcccgattatgggttttattccgcgcccagtgaccagcggggggctccctgc
tcctttgccgactatggctccctggggcctcaggcggctcagatgctgcaaagcgagcac
gccacatccgcctgcaactctcccctgcagcaccttcacagcccggatcagtttaagagc
ccaggtttgtatggcgctaaccccgctcgacctggagccttcccgggtgccaacagtccg
gggcccgtagccgatctgtacggcccgactagtcaggaatcggccgtggggaactacatc
agtgctgctagtcctcagcctggctccggcttcagccacggcattgctggccccttgatt
gcgacggcttttacaaacggataccattga
DBGET
integrated database retrieval system
